Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2154g0001 ATGGCAGAAGTGGGATTATCAATAGCAGCAAAACTTGCTGAATACTTGGTGAATCCAACATTACAGCAATTGCAATATTTGTTTTGTGTCGGCAAAATAAGCAGAAATGCTGAGACCAGAAAGGAGGGTCTGATTCTCAAGCAAGGGAGGGTGCAAGAACGTGTTGAAGAGGCCATTAATAAGACTGAGAGAATTGATAATGATGTTAAGAAGTGGAAGAATGAGGTTAAGATCCTTATAGCAGAGGTTGAGAACTTAGAGGAAGAATTGAGGGCCAACAATTGCTGCTTTCAAAAGTGGTGTCCTATGTGGAGGAGATATTGTCTCTGCAAAAAATTGACAAAAACAACTCAAAGGATGATACAACTAGACGCAGAGAGTGATAAGTTTAACCCATTTTCCCATCCTATTGTCATTCCTGTTATAGATCTTCACTCTTCTAAAAATTTTATACTCTTCGGGTCTACAAAACTGGCTTCTGATCAGTTGTGGAAGGCATTGCAAGATGATGGTGCCTTTATAATTGGGCTATTTGGTATGGGGGGCTCAGGCAAAACAATGTTGGTGAAAGAACTGGGGAAAAAAGCCAAGGCTTTGAAGCTTTTTGATCGAGTTGTTTTTACTACAGTTTCCCAAAGCACAGATATAAGGAAAATTCAGGGTGAAATTGCTGACTCGTTGGGACTCAAATTGGATGAAGAATCTGAAATGGGAAGGGCAAGAAGAATTGCACTAAGATTTCAAAGTTCAGGGGAACGTGTTTTGATGATATTGGATGATGTATGGGCTAAGCTAAATCTTGAAGATGTAGGGAATCCACATGGGGGAAGTCATCAAAGTAGCTGTAAAGTTCTCATAACCATACGCCGCCAAGAAGTATGCACTTTGATGGATTGTCAAAAGACAATTCCATTGCATCTGTTGACAAAAAATGAAGCTTGGATTCTGTTCCAAACTCATGCTAATGTGGATGATAGTGCTAGAGAAGTGGCACAAGAAATTGCTAAAGAATGTAAAGGACTGCCCATTGCAATTGAAGCTGTGGGGCTTTGCTTGAAAGGAAAAGGACTTGATGAGATGAATGCAGTGTTACATAGGTTAAGGCATTCAAAACCAATAAATATGGATGAGGGTGTAAGGGATGCTTTTTCTTGTCTCAAACTAAGCTATGATTATTTGAGAATCCCTGAAGCAAAATTGTTGTTCTTAGTGTGTGCTATATTTCCTGAAGATCATAAAATTATTATCGAAGATATTTTGAGATATGGAGTAGGGTTGGGCTTGTGTAGACATGCAGACTCTTTTGAAGTAGCTAGGAGCCAAGTTAGAGTGGCACTTAATATTCTCGTTGACTCTTCTTTGTTGACTTATTCTCAAAATGTTTGGAAGCAAGAATGCTTGACAATGCATGACATGGTTCGTGATGTAGCTTTATGGATCGCATCCAAAGAGGATTGTACCATTATGGTAAATTGTGCAAAAGAACTAGATGAATTGCTTGGGGATGAAGCAGTTAAAGATTGCTATGCAGTATCTTCATGGCATGAAGACAAAAAATTATGTCAATTTCCTTCTCAATTGGATGCTCCAAAGCTTGAGATTCTATTGTTAAATTCAACAAAGCCCTTGGATCTATCTCTTGCATCATTTGAAGGTTTAGAAGAACTCAAGGTTGTAGCTATGATTCATGACGGGCCTCTCCCTCAGAAGGAACTGCAACCTCAATCAATGCAATGGTTGTCTAATCTTCAAACTTTGCGGTTGCAAAAATGGGATTTAGGTGACATCTCTTTTGTGGTAAGATTAAGGAAACTTGAAATTCTTGACTTATGTGGTAGTAAGTTCAAAAAACTGCCAAGTGGAATTGAAAATCTAAACCAATTGAAATTGCTAGATTTGTCAATGTGTGAAGCAGAGGAGTGTTGTTGTGAAGTAATTGGAAGGTGTTCACAAATAGAAGAATTGTATGCTTCTAGGAATTTCCTGCACATGGGAAACACAAATTGTTATGAATGCCTTGTGGATATACCTGCTGTTCCAAAATTGAGGAGGTATATATTAGAAATGGGGCAGTGCAAATGTCCAAAAATTTGGACTAAAGGCAGGAGAGTTTTATACTTGGGACAACTAAATATCTTTATCTCTAGTGCATTAATCAGGAGTTTGGGGCAAAAAGCAACTGCAATTGAATTTTATGATCTACAAGAAGGCTGCAAAAGTTTCATCCCAGATGTAGTTCAAGCCATAGGGGGTATGAATGAATTAACTAAACTCCACCTTAATAGCTGTTCGGAGATAGAATGGCTTATCAATGAAACTACTACTCATGAAGATGTTGTTGTCCCCAGATTGGCTGAGTTGGAGCTGGTTCATATGGATAATCTAAGACAGCTATGTCATGGCCCTTCTTATCTTAACTTATTCCAAAATCTTGAAAGTCTAAACATAGACAATTGCCCTCAGTTGCTCAACATGTTTCCTGCTGATTGCAACTTAGGCAACCTTAAGAAGCTCCGGATTTCAAACTGTCCAATGTTAATCCTCTTCCATGTATCTGTTGCCTGCACTCTGCTTTCACTAAGAGAACTCAGCATACATAGTTGCCTTCAGTTACACAACATGTTTCCTGCTCATTGCAGCTTAGACAACCTTAAGTTCCTCCAAATTTTCAATTGTCCAATGTTGACATCTCTCTTCCCTGTCTCTGTTGCTTGCTCTCTGTTATCTCTGGAAGAGCTCAGAATAGAAAAATGCTGTAAATTGAAGAGTGTGATAGATGGAGAAGGTGGCAATAATGATTGGGAGAATCCAAGATTTCCAAAATGGGAAATTCTATCTGTTACTGATTGTTACCAATTAGAATCTGTATGTCCAATCTCTTGTGCTGAAGGGTTTGTGCAATTGAAACATCTAATCATAAAAGATGCTCTACTGTTGAAAGTTATATTTGGTGAAGAACAGTCAATATATGATCAAAATGGGACCCAGGGAATGCTTCCTCTTTTGGAAAATCTCATGCTGAAAGACCTCCCAAATCTTCTCAGAATTTGCTCAAAAGGCTATCATCCAATGTGGCCGTCTATAAAAAAAGTAGACTGGATAAACTGTCCGAGATTGAATATTCCACGTGATTCTCTCATTATTGGTTCAGAACTAAGGCAGCCACAACCAAATAGAGAATTGCATGCCCTTGGTGGCCATCAATTGAGAAATGAAGAGCCCGAGCCATTAGCAGCTGTTTCAAATATAGAGAGCATTAACCTTTGGAATTGCAGGGTAGTATCCCTATTCTACTGTCACAGTGGGGTTGAAGTTCCAAAGACTACAACATCCAATGGTCTCAATCTCATCCAACAAATTCCGATATTCCAATGCCTTAAAAAATTATCTGTGAATAACTGTGAAAAATTGAAATCTCTTTTCTCTGCTAGTACCTATCAAAGCCTTCCAGAGTTAACTTTTGTAACCATATCAAACTGTTGGGAATTGGAGGAAATCTTTGTAGAAAATGAACAAATTCAGAAGAAATTATCCAAAGCCCACTCTTGTTTACCAAAATTGCAGAGTTTAAGCATCAGCAGGTGCAACAAGCTAAGAATAATTTTCTCTGCTGTTATCTGTCAAAGCCTTCCAGAGCTGACTTTTGTGACCATATCTGACTGTGTGGAGTTGGAGGAAATTTTTGGAGAAAATGAACAAATTCAGAAGAAGCTATCCAAAGCCCACCCTTGTTTGCCAAAATTGCAGAGTTTAAGCATCAGCAAATGCTACAAGCTAAGAAGAATATTCTCTGCTGGTATCTGTCAAAGCCTTCCAGAATTAACTCATGTATACATATGGCAGTGTAAGGCATTGGAAGAAATTTTCACAAGGAATGAAGAAACTCAGAAGAATCTATCCATAGTCCAAGCTTTTCTCCCAAAGCTGCAGACGTTGGAAATCTGCAACTGCAATAAGCTGAAAATCATATTCTCCGTCATGACCAGATGCTCAAATATTGAAGATCATGACATCGACAGTGAAAAGGAGATTATGTTCCCAAACTTGAAACATATAGCACTTTACAAGTTACCAAGACTTGTTAATGTCTGCCAAGGATTTAAATTGCACATAGTGGAGTTTTGCAAAGTGCTGGTTCATGAATGCCCAAAATTTGTGCCATTTGTCGGTGCAAGTATTGCATGGAATCATGAAGGACTTGTTAGGACGTTTGTCTTGAAATGCAGCCAATTAAGCAATAATACAACTCTCTCAATACCAGTTTCTATTTTTAACTCCGAAGAACTTGATATTGAAAGTTCTAGAGTTCTAGACTTTTGTAAAGTAATTGGTGGTGGTGATGATTATAATGAACCACGTGAAGGCAGAGAGATGTTGAGGTATGAACATCAAATGCTAAAAGGTCTTGTTCCAACCCAAGTTTTGAGCTTCCAATGTCTTCATTCTTTAATGGTGATTGGATGTCAAAAGTTGAAGTTCTTATTCTCAACAAGCACCATTCTTCACAACAGCCTTCCCAAATTAACTTTCCTAACTTTATCTGGTTGTGATGATTTGGAGGAACTAATTGGGGACAACGATGAACCTCAGAACATGTCTAATGTTCAGCTTTGCTTCCCAAAACTAAGAGAGTTAGAGGTTAAGAGGTGCAGCAAGCTCAAAAGACTCTTTCCTTCAATTGAGATTGCACTTCCAAAGCTGAGAATACTTGTACTTGAAGGTCTACCCGCCATCATTGACATTTGTGGAAGTTTTCCCTTTCAGTTGCAGACTCAGTCTTTATTGTTCTTCAAAGTTAGGATTGTCCCATTTTCTCCAAAACCACACATGCTGCTCTGA 4839 0.3844 MAEVGLSIAAKLAEYLVNPTLQQLQYLFCVGKISRNAETRKEGLILKQGRVQERVEEAINKTERIDNDVKKWKNEVKILIAEVENLEEELRANNCCFQKWCPMWRRYCLCKKLTKTTQRMIQLDAESDKFNPFSHPIVIPVIDLHSSKNFILFGSTKLASDQLWKALQDDGAFIIGLFGMGGSGKTMLVKELGKKAKALKLFDRVVFTTVSQSTDIRKIQGEIADSLGLKLDEESEMGRARRIALRFQSSGERVLMILDDVWAKLNLEDVGNPHGGSHQSSCKVLITIRRQEVCTLMDCQKTIPLHLLTKNEAWILFQTHANVDDSAREVAQEIAKECKGLPIAIEAVGLCLKGKGLDEMNAVLHRLRHSKPINMDEGVRDAFSCLKLSYDYLRIPEAKLLFLVCAIFPEDHKIIIEDILRYGVGLGLCRHADSFEVARSQVRVALNILVDSSLLTYSQNVWKQECLTMHDMVRDVALWIASKEDCTIMVNCAKELDELLGDEAVKDCYAVSSWHEDKKLCQFPSQLDAPKLEILLLNSTKPLDLSLASFEGLEELKVVAMIHDGPLPQKELQPQSMQWLSNLQTLRLQKWDLGDISFVVRLRKLEILDLCGSKFKKLPSGIENLNQLKLLDLSMCEAEECCCEVIGRCSQIEELYASRNFLHMGNTNCYECLVDIPAVPKLRRYILEMGQCKCPKIWTKGRRVLYLGQLNIFISSALIRSLGQKATAIEFYDLQEGCKSFIPDVVQAIGGMNELTKLHLNSCSEIEWLINETTTHEDVVVPRLAELELVHMDNLRQLCHGPSYLNLFQNLESLNIDNCPQLLNMFPADCNLGNLKKLRISNCPMLILFHVSVACTLLSLRELSIHSCLQLHNMFPAHCSLDNLKFLQIFNCPMLTSLFPVSVACSLLSLEELRIEKCCKLKSVIDGEGGNNDWENPRFPKWEILSVTDCYQLESVCPISCAEGFVQLKHLIIKDALLLKVIFGEEQSIYDQNGTQGMLPLLENLMLKDLPNLLRICSKGYHPMWPSIKKVDWINCPRLNIPRDSLIIGSELRQPQPNRELHALGGHQLRNEEPEPLAAVSNIESINLWNCRVVSLFYCHSGVEVPKTTTSNGLNLIQQIPIFQCLKKLSVNNCEKLKSLFSASTYQSLPELTFVTISNCWELEEIFVENEQIQKKLSKAHSCLPKLQSLSISRCNKLRIIFSAVICQSLPELTFVTISDCVELEEIFGENEQIQKKLSKAHPCLPKLQSLSISKCYKLRRIFSAGICQSLPELTHVYIWQCKALEEIFTRNEETQKNLSIVQAFLPKLQTLEICNCNKLKIIFSVMTRCSNIEDHDIDSEKEIMFPNLKHIALYKLPRLVNVCQGFKLHIVEFCKVLVHECPKFVPFVGASIAWNHEGLVRTFVLKCSQLSNNTTLSIPVSIFNSEELDIESSRVLDFCKVIGGGDDYNEPREGREMLRYEHQMLKGLVPTQVLSFQCLHSLMVIGCQKLKFLFSTSTILHNSLPKLTFLTLSGCDDLEELIGDNDEPQNMSNVQLCFPKLRELEVKRCSKLKRLFPSIEIALPKLRILVLEGLPAIIDICGSFPFQLQTQSLLFFKVRIVPFSPKPHMLL 1612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2154g0001 1612 PRINTS Disease resistance protein signature 248 262 - -
Prci2154g0001 1612 PRINTS Disease resistance protein signature 623 639 - -
Prci2154g0001 1612 PRINTS Disease resistance protein signature 174 189 - -
Prci2154g0001 1612 PRINTS Disease resistance protein signature 338 352 - -
Prci2154g0001 1612 SUPERFAMILY L domain-like 1057 1580 - -
Prci2154g0001 1612 Gene3D - 307 388 IPR042197 -
Prci2154g0001 1612 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 967 1263 - -
Prci2154g0001 1612 Gene3D - 389 478 IPR036388 -
Prci2154g0001 1612 Gene3D - 148 303 IPR027417 -
Prci2154g0001 1612 Gene3D Ribonuclease Inhibitor 1005 1350 IPR032675 -
Prci2154g0001 1612 SUPERFAMILY L domain-like 468 975 - -
Prci2154g0001 1612 Gene3D Ribonuclease Inhibitor 1351 1595 IPR032675 -
Prci2154g0001 1612 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Prci2154g0001 1612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 405 IPR027417 -
Prci2154g0001 1612 FunFam Probable disease resistance protein At1g61300 145 302 - -
Prci2154g0001 1612 Coils Coil 55 93 - -
Prci2154g0001 1612 Gene3D Ribonuclease Inhibitor 506 1004 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2154g0001 175 680 WRKY Transcription Factor Family AT5G45050 22.778 1.25e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2154g0001 - - pcin:129301500 3244.91