Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2139g0002 ATGGCTTCTTCGTCTTCTACTTCTTCCTCCAAACGGCCAAAACGGATTTACGATGTCGTCTTGAGTTTCAGAGGCGAAGACATTCGTAACAGTTTCGCTTCGCATCTTTATGCCGCTCTAAGACAGGCCGGGATCCATGCTTTCATGGACGATAAGGAGCTTGAAAGAGGAGAAGAGATCTCTCGCTCATTACTGCAAGCAATCGAAGGATCACAAATTGCGCTCGTGATTTTATCTCCGAATTACGCATCTTCTAGATGGTGTCTGAATGAGTTGGTGAAAATAATGGAATGTCAAAAAACCCAAGGTCAGCGGGTTATGCCCGTATTCCATGGCGTCGATCCGTCAGACGTTCGTCATCAGAGAGGCTCATATGGTGAGGCGATAGAAAAACACGAGCATAAGTTGGGAAGGGGAAGCGATCGGGTGTCGCAGTGGCGGAAGGCACTCGAAGCGGTTGCGAATACTTCCGGCTTCGATTCAGCTTTTCGGGATGAAGCTTATGTAATTAAAGGGATTGTCGATGATGTTCTTGTAGAATTAAACACTGGAGATTTGATTATTGCTGACCATCCAGTAGGAATAGAATCACGGCTTCATGACTTGACTATTGAATGGTCAAAAAAGAGGTCACGAAAAGTTCTTATCATAGGCCTCTGGGGAATGGGAGGTGCTGGCAAAACAACCGTTGCCAAAGCAATCTACAATGAAATTGGTCGCCACTTTAAAAGAAGTTTCCTGAAAAATATTAGAGAAATTTCAAAGCAAGATAATGGCCACGTTATTTTGCAAAAACAACTTATTTATGATATAACTGGGAAAGAAGTTTTCAAGATATGTGACATTGATAGGGGAAAAAAAATAATTCAAGACAGATTTCCCCACATAAAAGCACTTGTTGTATTGGATGATGTGGATAGTATTTGTCAACTGAACGCATTATGTGAGAGTCGTGAATGGTTTTGTCCAAGGAGTGTAATAATCATCACAACTAGAGATATGCATCTGCTTAATGTCCTTAAAGCTGACTACAAATATGAAGTCAGAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCCTTCAAGAAAAAAGCTCCCTTTGAAGAATTTATGGAACTCTCTAGAAGTGTAGTTGCTTATTGTGGAGGACTTCCACTTGCTCTTGAAGTCATTGGTTCTTATTTGTGTGAGAAAACAATTCAACAGTGGAAGGCTGCATTGTCCAAACTCGAAAGGATTCCTCATAAAGATATTCAAGCAAAGTTAAAAATAAGCTTTGATGGTTTAGATGATTATACAGAGAAGGAAATTTTCCTTGACATATGTTGCTTCTTTATCAATAGGGACAGAAACTATGTAACGCAGATATTAGATGGTTGTGGACTTCATGCAGAAAATGGACTACAAATTCTCATAGATCGGAGCCTCATAAAAGTTAGTAGGAATAATAAGCTTGAAATGCATGATTTATTACGGGATATGGGAAGAGAAATCATCCGTGATAGCCCACCTAAGGATCCAGAGGAATATAGCAGATTATGGATTCATGAAGATGTACTTGAAGTGTTAAGAGAACATACGTTGCTAGAAAGGTTGAAGACAATCAATCTCAGCCATTCCTCTTATTTGACACAGACTCCTGAATTTACAAAACTGCCAAACCTTGAAAAGTTGATACTAAAAGATTGTCCGAGCTTGATGTTAGTTCACAATAGTATTGGAGATCTGGAAAATCTTCTTGTGGTAAATCTAAAAGGCTGCAAGTGCCTTAGGCTTCTTCCTAGAAGCATCTACAAGTTGAAATCTTTAAAAACTCTTATTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATTTTGAGCAAATGGAATCCTTGACTGTTTTAATGGCAGATAATACTGCCATAACACAAGCACCCAGGTCATTAGCAAGATTGCAGGCGCTTGTACATGGATATGTATCTTTGTGTGGGTATGAAGGAAGAGCACAAGATGTATTTCCTTCTCTCATACAGTCTTGGATGTCACCCACAAATATTTTCCAATCCCATAGTGAAGCATTTTTGCAGGGCATATCATCTATTTTTCTCAGCTGTACAGATTGGTAG 2124 0.3941 MASSSSTSSSKRPKRIYDVVLSFRGEDIRNSFASHLYAALRQAGIHAFMDDKELERGEEISRSLLQAIEGSQIALVILSPNYASSRWCLNELVKIMECQKTQGQRVMPVFHGVDPSDVRHQRGSYGEAIEKHEHKLGRGSDRVSQWRKALEAVANTSGFDSAFRDEAYVIKGIVDDVLVELNTGDLIIADHPVGIESRLHDLTIEWSKKRSRKVLIIGLWGMGGAGKTTVAKAIYNEIGRHFKRSFLKNIREISKQDNGHVILQKQLIYDITGKEVFKICDIDRGKKIIQDRFPHIKALVVLDDVDSICQLNALCESREWFCPRSVIIITTRDMHLLNVLKADYKYEVREMDESESLELFSWHAFKKKAPFEEFMELSRSVVAYCGGLPLALEVIGSYLCEKTIQQWKAALSKLERIPHKDIQAKLKISFDGLDDYTEKEIFLDICCFFINRDRNYVTQILDGCGLHAENGLQILIDRSLIKVSRNNKLEMHDLLRDMGREIIRDSPPKDPEEYSRLWIHEDVLEVLREHTLLERLKTINLSHSSYLTQTPEFTKLPNLEKLILKDCPSLMLVHNSIGDLENLLVVNLKGCKCLRLLPRSIYKLKSLKTLILSGCSLIDHLEEDFEQMESLTVLMADNTAITQAPRSLARLQALVHGYVSLCGYEGRAQDVFPSLIQSWMSPTNIFQSHSEAFLQGISSIFLSCTDW 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2139g0002 707 Pfam TIR domain 17 180 IPR000157 GO:0007165
Prci2139g0002 707 Pfam NB-ARC domain 207 423 IPR002182 GO:0043531
Prci2139g0002 707 SUPERFAMILY L domain-like 491 663 - -
Prci2139g0002 707 Gene3D - 11 183 IPR035897 -
Prci2139g0002 707 Gene3D Ribonuclease Inhibitor 471 690 IPR032675 -
Prci2139g0002 707 Gene3D - 184 346 IPR027417 -
Prci2139g0002 707 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Prci2139g0002 707 FunFam Disease resistance protein (TIR-NBS-LRR class) 352 434 - -
Prci2139g0002 707 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Prci2139g0002 707 PRINTS Disease resistance protein signature 216 231 - -
Prci2139g0002 707 PRINTS Disease resistance protein signature 385 399 - -
Prci2139g0002 707 PRINTS Disease resistance protein signature 292 306 - -
Prci2139g0002 707 PRINTS Disease resistance protein signature 602 618 - -
Prci2139g0002 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Prci2139g0002 707 SMART till_3 16 156 IPR000157 GO:0007165
Prci2139g0002 707 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Prci2139g0002 707 Gene3D - 350 434 IPR042197 -
Prci2139g0002 707 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 533 655 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2139g0002 524 654 WRKY Transcription Factor Family AT4G12020 35.115 3.53e-10 62.0