LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci212g0003	ATGGCCACCGTTGCTGCCGCTCGAGGAATAGGTGTGGGAGTGACGAAGCTCCAAAGACCCAACCACTCCAACCACAACAAGAAGTCGCTCTTTTTGGGTCAAAAACTTCGAAATAAACCCTCCGTTACAGAATCCCATTGCGGTGGAGGAATCACAACACCGAACCCTAAATCGTTCGTGGCCTGCGCATTAGGAGGCGAATGGCTTGATTCGATTCACCACTTGTTTGTGGGCGTCGGGGTTGGGCTTCCTTGCACGGTCATGGAGTGCGGCGATATAATCTACAGAAGCACTCTTCCGAAGTCGAATGGCTTGACGATTACAGCTCCTGGGGTGGTTTTGGCTCTGGGTGCTGTGTCCTACCTCTGGGCTACGCCTGGTGTGGCCCCTGGTTTCTATGACATGTTTGTTCTTGCCTTTGTTGAAAGATTGTTCAGACCTACTTATAAAAGGGATGACTTTGTCCTAGGGAAGAAGTTGGGTGAGGGATCGTTTGGAGTAGTTTACAGGGTTTCATCGACCAAGAAGCCCTCTTCAAAGGAAGGTGACTTGGTCTTGAAGAAGGCTACTGAATATGGTGCAGTAGAAATTTGGATGAATGAGCGTGTTCGAAGAGCTTGTGCAAATAGCTGTGCTGATTATGTTTATGGTTTCCTTGAGAATTCTGGGAAGAAGGGTGGTGAATACTGGCTTATATGGAAGTTTGAAGGGGATGCTACTCTGGCAGACCTAATGCAGAGCAAAGAGTTTCCATATAATGTTGAAACAATGATTCTGGGCAAGGTCCAGGACTTGCCTAAGGGATTGGAGAGAGAAAATAGAATACTTCAAACAATTATGGGGCAGATCTTGTTTGCATTGGATGGTCTTCACTCAACTGGTATCGTGCATAGGGATATTAAGCCCCAGAATATTATTTTCTCTGAAGGATCTCGTACATTCAAGATTATTGATCTTGGTGCTGCAGCAGATTTGCGGGTTGGCATCAACTATATTCCTAACGAGTTTCTGTTGGATCCAAGATATGCTGCCCCAGAGCAGTACATAATGAGCACACAAACTCCCTCTGCGCCCTCAGCTCCGGTTGCAACTGCACTTTCCCCGGTCCTATGGCAGTTGAATCTACCGGACAGATTTGATATCTATAGTGCTGGCCTAATATTTCTTCAAATGGCATTCCCTGGATTACGCTCTGATAATTGTCTCATACAATTTAAACGTCAGTTGAAGAGGTGTGACTATGACTTGGTTGCGTGGAGAAGAAGTGTAGAACCTCGTTGTGGTCCTGAACTAAGGAGAGGCTTTGAGCTTCTGGATTTAGATGGCGGAATAGGGTGGGAGCTTCTGACATCAATGGTCCGTTATAAAGCACGGCAACGACTCAGTGCAAAAGCAGCATTAGCTCATCCCTATTTTGACAGGGAAGGCTTGTTGGCACTATCTTTCATGCAAAATCTAAGACTGCGGCTCTTACGAGCAACGCAGCAGGATTATGGAGAAGCAGCCAAATGGATTATTCAGCTCATGGCAAAATCTGGAACCTCACAAGTTGGAGGATTTACTGAAGCTCAGCTCCAGGAACTAAGAGAAATAAAACCGAAGAAGAATAGCGCACAAAGAAATGCTTTAGCCTCAGCTCTCAAACTTCGGAGGAAAATTATAAAAACGTTGAATGAGAGTATGGATGAGCTTAACCAACGCAGGAAAAGCCTATGGTGGAGCAGATGGATCCCCAGGGAAGAATGA	1746	0.4599	MATVAAARGIGVGVTKLQRPNHSNHNKKSLFLGQKLRNKPSVTESHCGGGITTPNPKSFVACALGGEWLDSIHHLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTITAPGVVLALGAVSYLWATPGVAPGFYDMFVLAFVERLFRPTYKRDDFVLGKKLGEGSFGVVYRVSSTKKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADYVYGFLENSGKKGGEYWLIWKFEGDATLADLMQSKEFPYNVETMILGKVQDLPKGLERENRILQTIMGQILFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPNEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNCLIQFKRQLKRCDYDLVAWRRSVEPRCGPELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQNLRLRLLRATQQDYGEAAKWIIQLMAKSGTSQVGGFTEAQLQELREIKPKKNSAQRNALASALKLRRKIIKTLNESMDELNQRRKSLWWSRWIPREE	581

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci212g0003	581	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	295	307	IPR008271	GO:0004672\|GO:0006468
	Prci212g0003	581	PANTHER	SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED	68	556	-	-
	Prci212g0003	581	Gene3D	Phosphorylase Kinase; domain 1	141	234	-	-
	Prci212g0003	581	ProSiteProfiles	Protein kinase domain profile.	154	472	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci212g0003	581	SUPERFAMILY	Protein kinase-like (PK-like)	138	474	IPR011009	-
	Prci212g0003	581	SMART	serkin_6	154	472	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci212g0003	581	CDD	STKc_SNT7_plant	158	472	-	-
	Prci212g0003	581	Gene3D	Transferase(Phosphotransferase) domain 1	262	476	-	-
	Prci212g0003	581	Pfam	Protein kinase domain	156	347	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci212g0003	581	FunFam	Serine/threonine-protein kinase STN7, chloroplastic	263	477	-	-
	Prci212g0003	581	ProSitePatterns	Protein kinases ATP-binding region signature.	160	187	IPR017441	GO:0005524

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci212g0003	272	473	Core Cell Cycle Gene Families	AT2G38620	31.455	3.05e-17	80.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Prci212g0003		Pkinase	2.5e-18	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci212g0003	-		-	qsa:O6P43_032791	951.429