Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2120g0001 ATGGAAGAAGATACCTTTTTCCCTCCTGATACAGATCTCGACCTCAGCTTCACCAGCACCACCTCCGCCACCACCGATCGCACTTTTGCTTCCTCTAGTGCTCGCACCAGCTTGGCTCGCACCAGCTTGACTCTCAGCTTTAACGAACGTCTATCCACCGCCTCCGCCTCCGCCGGAACTTCCTCTTCCACACTCTTCCTCCGACCGCATCGAGCCTCCGATCCTCATTGGTCAGCCATCAAAGCTGCTACCACTCTCTCGTCAGACGGTACCCTCCACCTCCACCACCTCAAGCTCCTCCGCCACCTCGGCACAGGGAATCTCGGGCGAGTATTCCTCTGCCGTCTCCGCGACTACGATCACGCAAACTTTGCTCTCAAGGTTGTCGATAAGGACTTGCTAAGCAGCAAGAAGTTCTCCCATGTGCAAATGGAGGGGGAGATCCTGTCCATGCTGGACCATCCTTTTCTTCCTACGCTCTACGCAAGATTGGAAGTCTCGCATTACACGTGTCTGTTGATCGATTACTGCCCCGGCGGCGACCTGCACTCTCTCCTCCGAAAACAGCCCGGGAACCGGCTTCCGGTTCAGGCGGTTAGGTTCTTCGCGGCGGAGGTTTTGGTAGCGTTGGAATATTTGCATGCGCTTGGCATCTTGTATAGGGATCTGAAACCAGAGAACGTTCTATTACGTGAAAACGGCCACGTCATGCTGTCCGATTTTGATTTGTGCTTCAAGGCCGACGTGGTCCCCGCATTCGAGTGTCGTGCAGGGCCCACTAAGAGAAAGAAGCTCGTGTGCAATTGTTTAGGTGGTGTCAGAGCGAGATCGCCGGAGAGAGTGGTGGAAGCAGATTTCGTGGCGGAGCCAAAGGCGGCTTTCTCGAGGTCCTGTGTTGGGACGCACGAGTACTTGGCACCGGAGTTAGTCTCCGGCAAGGGCCACGGCAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATTTGTGAGTTGTTGTACGGAACGACGCCGTTTAAAGGGCTGAGCAAAGAGAGCACCCTGCGCAATATTGCATCGAGTAGAAACGTGAGCTTCCACGTGGCGGAAGTAGAGGAAGAAGGAATGGCTGAAGTGAGGGATTTGATGGAGAAACTGTTGGTGAAGGACCCGAGGCGAAGGCTAGGATGCGCCAGGGGTGCGACCGATATTAAACGACACGCGTTTTTTGGTGGAATCAAGTGGCCGTTGATCTTAACCTACAGACCACCGGAGGTTCGTGGACTAGTGACGAAGAAGGGGTCGCATATGAGCAGTCACATGACGCATAGGAGGAGACCGTGGTGGTGGAAGGGGCTTGATTATGTTGTCAAGAATAAGAAGGGATATAAATATAGCTTAATCTCCAACTATAGTAATGGCAATTACTATCGTTACGTTAATAGTAATCAAGCAAGGAAATAA 1440 0.5319 MEEDTFFPPDTDLDLSFTSTTSATTDRTFASSSARTSLARTSLTLSFNERLSTASASAGTSSSTLFLRPHRASDPHWSAIKAATTLSSDGTLHLHHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKFSHVQMEGEILSMLDHPFLPTLYARLEVSHYTCLLIDYCPGGDLHSLLRKQPGNRLPVQAVRFFAAEVLVALEYLHALGILYRDLKPENVLLRENGHVMLSDFDLCFKADVVPAFECRAGPTKRKKLVCNCLGGVRARSPERVVEADFVAEPKAAFSRSCVGTHEYLAPELVSGKGHGNGVDWWAFGVFICELLYGTTPFKGLSKESTLRNIASSRNVSFHVAEVEEEGMAEVRDLMEKLLVKDPRRRLGCARGATDIKRHAFFGGIKWPLILTYRPPEVRGLVTKKAXSHMSSHMTHRRRPWWWKGLDYVVKNKKGYKYSLISNYSNGNYYRYVNSNQARK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2120g0001 480 Gene3D Transferase(Phosphotransferase) domain 1 295 420 - -
Prci2120g0001 480 Pfam Protein kinase domain 99 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2120g0001 480 SUPERFAMILY Protein kinase-like (PK-like) 75 428 IPR011009 -
Prci2120g0001 480 Gene3D Transferase(Phosphotransferase) domain 1 181 247 - -
Prci2120g0001 480 Gene3D Phosphorylase Kinase; domain 1 95 180 - -
Prci2120g0001 480 Gene3D Phosphorylase Kinase; domain 1 421 436 - -
Prci2120g0001 480 FunFam Serine/threonine-protein kinase OXI1 293 420 - -
Prci2120g0001 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Prci2120g0001 480 ProSiteProfiles Protein kinase domain profile. 97 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2120g0001 480 PANTHER FLIPPASE KINASE 1-RELATED 36 422 - -
Prci2120g0001 480 SMART serkin_6 97 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2120g0001 480 FunFam Serine/threonine-protein kinase OXI1 181 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2120g0001 1 480 AGC Kinase Gene Family AT3G14370 63.968 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci2120g0001 Pkinase 1.9e-52 CL0016