Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2108g0002 ATGATATTGCTGAGAGAAAGAAATTTACAGTTGATCCGTGATATTCCTGAAGAAATCAAGACCTTTGCTGTATATGGTGATCAATCAAGGATTCAACAGGTCTTGGCTGATTTCTTATTGAATATGGTGCGCTATGCACCATCTCCAGATGGTTGGGTAGAGATTCATGTTTTTCCGAGAATAAGACAAATTTCTGACGGACTTACTCTTCTTCATACTGAATTCAGGATGGTATGTCCCGGTGAAGGTCTTCCTGCTGAATTGATTCAAGACATGTTCAATAGCAACCTGTGGGTAACTCAAGAAGGCTTAGGGCTGAGCATGTGCAGGAGGATTCTAAAGCTAATGAGCGGTGAAGTCCAATATATTAGGGAGTCAGAACGATGCTACTTCTTAGTAATTATTGAGCTGCCCATGACACGGAAAGATTCTAAAAATGTGAACTAG 447 0.4049 MILLRERNLQLIRDIPEEIKTFAVYGDQSRIQQVLADFLLNMVRYAPSPDGWVEIHVFPRIRQISDGLTLLHTEFRMVCPGEGLPAELIQDMFNSNLWVTQEGLGLSMCRRILKLMSGEVQYIRESERCYFLVIIELPMTRKDSKNVN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2108g0002 148 ProSiteProfiles Histidine kinase domain profile. 1 141 IPR005467 -
Prci2108g0002 148 PANTHER TWO-COMPONENT HISTIDINE KINASE 6 124 - -
Prci2108g0002 148 FunFam Phytochrome 1 143 - -
Prci2108g0002 148 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 130 IPR003594 -
Prci2108g0002 148 Gene3D - 2 147 IPR036890 -
Prci2108g0002 148 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4 138 IPR036890 -
Prci2108g0002 148 SMART HKATPase_4 26 141 IPR003594 -
Prci2108g0002 148 CDD HATPase_Phy-like 25 137 IPR044767 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2108g0002 1 139 Histidine Kinase Gene Family AT4G16250 62.590 3.73e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2108g0002 K12121 - pcin:129301439 299.286