Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2108g0001 ATGGGAACTCCACCACCAGAAGAGCTTCTCAAGAAGATCGAGGACCTCGAGGCGGGTCACGCTCATCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCGAGCGATGCCCGAGCCGAGCAGAGCCATCATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTGCGTCCAGGAGGAGAGCTGGAGGCGGCGGATTCGATGGACCTGCTTCGTGGAAGAAAGGTTCAACTTCGTTTAAACATTCGTCACCGCTTCAGAGAGAGAGCCGTAGCAGTGATCCTCAGAATGATGGAGAAGTTGGCGTTGGAAGGGGCCCTTCAGCTGTGAATTTTACTGATAGGCAGTATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCATATATTGGATCTTAACGGTCGTATGATATACTGGAACCGTAGTGCTGAAAATTTATACGGTTATACAGCGGAAGAAGCCCTCGGTAAGGATGGCATTGAACTGCTTGTAGACCCCAGGGATTTTGCCGTAGCCAATGATATAGTCAACCGGGTCATTAAGGGAGAGAAATGGATTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTCGCTTTAGCTAGTAATACCCCTTTATATGACGATGATGGAAATTTGGCTGGCGTTATTTCGGTCTCGAGTGATTCACGCCCCTTCCTTGACACGAGAGTTCCGTTATCAGGAGTAAAGCACTCTGAAACAGGTTCAGGCTCCAGCAATCTTAAAAGTGGCATCACAAATAAACTTGGTCTGGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTTCTAATTTGGCATCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAATGGGAGAAAATGTGGATCGTGAAGGTGGGAGCGGTGAAAGTCATCATTCTGAGCATAGCTTCTCAGATTCTGTTCTCTCAGACCAGAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCATCTCCTTTTGGTCTATTTTCTCACAAAGAAGACAAAAGTCAAGGAAAAAATTTAAAAGATTACGGTGATGAGGGTGAAGGAAAACCTAGTCATAAAGTATTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAAAACAATATCATGGCCATGGAAAGCATATGAACGGGATGGGTCAGAGGGAAGGAATGTCCGTGTTGGTTGGCCCTGGGTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGAAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGAGGTCGACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCAGTCAATAATAAATTGGACATGGATACCGATTGTTTGGATTATGAAATCTTGTGGGAAGACTTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCACGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATACTCAGATGATGTAATAATGTCCTTCAGACAAGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTTTTCATGGGGGCGGTAACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCCCGTGGAAGCTTGTTTCGCTTACTTCAGAGAAACACATCCAAACTTGACTGGAGACGACGTGTTCATATGGCTTTAGACATTGTAAGCACGGGTGTAAACTATCTTCATCATTGCAGCCCACCTATCATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAGGAACTGGACTGTTAAGGTTGGTGATTTTGGCCTTTCGCGCCTAAAGCATGAAACTTATCTCACGACAAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCTTCTGATGAGAAGTCTGATGTATACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTAATTGGAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCGAAGGATGTTGATCCTACGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCTGGTCGGCCAACATTTCAGGAACTGCTAGAAAGGCTGAGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCAGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAATCCTAA 2319 0.4588 MGTPPPEELLKKIEDLEAGHAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGASRRRAGGGGFDGPASWKKGSTSFKHSSPLQRESRSSDPQNDGEVGVGRGPSAVNFTDRQYLNILQSMGHSVHILDLNGRMIYWNRSAENLYGYTAEEALGKDGIELLVDPRDFAVANDIVNRVIKGEKWIGQFPAKNKMGEKFFALASNTPLYDDDGNLAGVISVSSDSRPFLDTRVPLSGVKHSETGSGSSNLKSGITNKLGLDSQQPLQVGIASKISNLASKVSNKVKSRIRMGENVDREGGSGESHHSEHSFSDSVLSDQREDANSSGASTPRGDVPPSPFGLFSHKEDKSQGKNLKDYGDEGEGKPSHKVLTSKAEAWIQKKTISWPWKAYERDGSEGRNVRVGWPWVQNDQENEPAQRKPLSSCVRPESQAGEGGRPVNNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIVSTGVNYLHHCSPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPTWAAIIESCWHSDPAGRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2108g0001 772 Coils Coil 13 33 - -
Prci2108g0001 772 PRINTS Tyrosine kinase catalytic domain signature 567 580 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 PRINTS Tyrosine kinase catalytic domain signature 717 739 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 PRINTS Tyrosine kinase catalytic domain signature 607 625 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 PRINTS Tyrosine kinase catalytic domain signature 654 664 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 PRINTS Tyrosine kinase catalytic domain signature 673 695 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Prci2108g0001 772 MobiDBLite consensus disorder prediction 414 451 - -
Prci2108g0001 772 MobiDBLite consensus disorder prediction 291 321 - -
Prci2108g0001 772 Gene3D Transferase(Phosphotransferase) domain 1 572 758 - -
Prci2108g0001 772 FunFam PAS domain-containing protein tyrosine kinase family protein 571 763 - -
Prci2108g0001 772 Pfam PAS domain 132 229 IPR000014 -
Prci2108g0001 772 Gene3D PAS domain 130 232 - -
Prci2108g0001 772 Pfam Protein tyrosine and serine/threonine kinase 493 746 IPR001245 GO:0004672|GO:0006468
Prci2108g0001 772 SMART serkin_6 493 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2108g0001 772 FunFam PAS domain-containing protein tyrosine kinase 486 570 - -
Prci2108g0001 772 CDD STKc_MAP3K-like 499 746 - -
Prci2108g0001 772 MobiDBLite consensus disorder prediction 80 96 - -
Prci2108g0001 772 MobiDBLite consensus disorder prediction 15 112 - -
Prci2108g0001 772 MobiDBLite consensus disorder prediction 288 374 - -
Prci2108g0001 772 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Prci2108g0001 772 SUPERFAMILY Protein kinase-like (PK-like) 481 746 IPR011009 -
Prci2108g0001 772 ProSiteProfiles Protein kinase domain profile. 493 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2108g0001 772 MobiDBLite consensus disorder prediction 322 337 - -
Prci2108g0001 772 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Prci2108g0001 772 SMART pas_2 119 186 IPR000014 -
Prci2108g0001 772 CDD PAS 132 229 IPR000014 -
Prci2108g0001 772 Gene3D Phosphorylase Kinase; domain 1 486 570 - -
Prci2108g0001 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Prci2108g0001 772 MobiDBLite consensus disorder prediction 351 374 - -
Prci2108g0001 772 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 752 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2108g0001 1 768 MAP Kinase Kinase Kinase AT3G06620 61.753 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci2108g0001 PK_Tyr_Ser-Thr 4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2108g0001 - - qsa:O6P43_021865 1132.47