Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2106g0011 ATGGCTGACAGTCATGAATCAGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATTAAAGCATTGGAAGCTGCAAGAGGTAATGGTACCAGCATGATTTCTTTAATAATGCCTCCTCGTGATCAAATATCCAGAGTCACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAAAGCAGGGTCAATCGACAGTCAGTATTGGGAGCCATTACTTCTGCACAACAGAGGTTGAAGTTATATAATAAGGTTCCTCCAAATGGATTGGTTCTTTATACCGGAACTGTTGTCACTGAAGATGGCAAAGAAAAAAAGGTGACAATTGATTTTGAACCTTTCAAGCCTATTAATGCGTCACTTTACCTTTGTGATAACAAGTTTCACACTGAAGCTTTAAATGAGCTTTTAGAATCTGATGACAAATTTGGATTCATTGTTATGGACGGAAATGGTACCCTTTTTGGGACGTTAAGTGGAAATACGCGTGAGGTGCTTCATAAATTTACTGTTGATCTACCAAAGAAACATGGTAGAGGAGGGCAGTCTGCTTTGCGTTTTGCTCGTCTTCGCATGGAAAAACGACACAACTATGTTAGAAAGACTGCTGAACTCGCCACACAGTTTTTCATTAATCCTGCCACTAGTCAGCCTAATGTTGCTGGACTTATACTTGCGGGTTCAGCTGACTTCAAGACTGAGCTGAGCCAATCGGATATGTTTGATCCTCGTCTAGCAGCAAAAATATTAAATGTGGTTGATGTTTCATATGGTGGGGAGAATGGTTTTAATCAAGCTATTGAGTTATCTGCTGAGATTTTGTCGAATGTGAAGTTCATTCAAGAAAAGAAGTTGATAGGGAAATACTTTGAGGAGATCAGCCAGGATACTGGTAAATATGTCTTTGGGGTTGATGACACATTGAAAGCTCTGGAGATGGGTGCCATTGAGACACTTATAGTATGGGAAAGTTTGGATATCAATAGGCTTGTACTGAAAAATAATTCTACTGGTGAGATTGTCGTAAAGCACTTAAACAAGGAACAAGAGGCTGATGAAACCAATTTCCGGGATTCAGCCACTGCTGCCGAGTTGGAGCTGCAGGACAAGATGCCATTGCTGGAGTGGTTTGCCAACGAGTACAGACGATTTGGTTGCTCGCTGGAATTTGTGACCAATAAATCTCAAGAAGGATCGCAGTTTTGCAGAGGGTTTGGTGGCATTGGAGAGCGTTCCTTCACTTGGCTATGGACAATTGGATGGGGCATCATTGCTGTTATGACTCGACATTCCCATCCATCACTTGGATTTTATGGCTAA 1326 0.4103 MADSHESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAIETLIVWESLDINRLVLKNNSTGEIVVKHLNKEQEADETNFRDSATAAELELQDKMPLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGERSFTWLWTIGWGIIAVMTRHSHPSLGFYG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2106g0011 441 SMART eRF1_1_2 5 140 IPR005140 -
Prci2106g0011 441 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 3 411 IPR004403 GO:0003747|GO:0006415
Prci2106g0011 441 Gene3D eRF1 domain 2 136 277 IPR042226 -
Prci2106g0011 441 Pfam eRF1 domain 3 281 411 IPR005142 -
Prci2106g0011 441 Pfam eRF1 domain 1 18 138 IPR005140 -
Prci2106g0011 441 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Prci2106g0011 441 Gene3D - 279 411 IPR029064 -
Prci2106g0011 441 FunFam Peptide chain release factor subunit 1 279 415 - -
Prci2106g0011 441 Pfam eRF1 domain 2 144 277 IPR005141 -
Prci2106g0011 441 FunFam Eukaryotic peptide chain release factor subunit 1 2 135 - -
Prci2106g0011 441 SUPERFAMILY L30e-like 278 411 IPR029064 -
Prci2106g0011 441 SUPERFAMILY Translational machinery components 142 276 - -
Prci2106g0011 441 Gene3D eRF1 domain 1 1 135 IPR024049 -
Prci2106g0011 441 FunFam Eukaryotic peptide chain release factor subunit 1 136 277 - -
Prci2106g0011 441 NCBIfam peptide chain release factor aRF-1 12 411 IPR004403 GO:0003747|GO:0006415
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2106g0011 1 411 Eukaryotic Initiation Factors Gene Family AT3G26618 90.754 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2106g0011 K03265 - pop:7466289 770.77