Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci20g0003 ATGATCATCATGTTTCTTACAGGATTTGGTTCAAGTTCTTGCTCGCTACTCCTCTTTTTTATGTATTTGTTCTCTTTTTCCGTTCTGGTTTGTGCCTTGGACACCGTCCCACCATCTCTAGAGATCCATGAACCCCAAACAATAAGGTCAAATAATAGCATGTTTACTCTAGGATTCTTTAGTCCTGAGAATTCCACGAATCGCTACTTAGGAATCTGGCTTATGTCTGAATCAACTATTGTTTGGGTGGCAAACAGAGACGACCCAGTTACAGATTCTTCTGGGATTCTTACAATATCGGAGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAAGTTGTCTGGTCAACAAATGTCTCACATATTGCATCAAATTCCAGTGTTCAACTCTTGGATTCCGGCAACCTTGTCCTCACTGATAGGACTACCGGAGCAATGGTGTGGCAGAGTTTCCAACATCCCTGTGATACATTATTACAAGACATAAAACTCAGTACTAATCAACAAACAGGCGAGAAAGTGAAACTTACATCATGGAAAAGTACATCTGATCCATCCCGTGGAAGATTTTCTTTAGGTCTAGAGCATCTTAATTTTACTCAAGTGTTCATTTGGAAAGAAAATCGTCCTCACTTTCGTAGTGGTCCTTGGAATGGTACAAACTTTCTTGGGGTACCTGGGACGTCATCTATGATTGGAGATGGCTTCCAAGTGAAAGAAGATGAAGGAATTTTTGAAATTTCTTTTCATTTCATAGAAAAGTCTCTGTTGATAACTTACGATTTAGATTCTCAAGGAAAAGTGTCAGAACAGAGTTGGGATTTCCAGAAAAATGCATGGGAATTGCGGTGGAGAATTGGGGATTCTGAGTGTGATTTTTATGGAAAATGTGGTCCATTTGGGATCTGCAATTCACAGAGCTCCCCAATCTGTAGCTGCTTGAGAGGGTTTGAACCTAAGAACAAAGAAGAATGGGAAAAGCAGAACTGGACCAGTGGATGCGTGAGAAGGGAAGCACTTCAGTGTGTGAAAAACAATAATGGCTCTCAAGCTACTAGCACAACAGATGGGTTTTTCAAGCTGGAGAGGGTGAAAGTACCAGATCAAGCAGAGTCATTACCATATAACTTCAGAGATGTTGTTGATTGTCGAACTCCATGTCTGAAGAGTTGCTCTTGTAAAGCTTATGCATATGACCCAGGCCTTGGCTGTATGGTTTGGAGTGTAGATTTACTTGACATCTTGAGCAATTCACCTGGAGGAGTGGATCTTTACTTACGTTTAGCCTCCTCAGAACTTGATACAGTTGGGAGGAGTAACATGACAGCACCAATTGTAATATCAATTCTGACAGGAACAGTTGTCATTATTGCCTCTGGATTTTTCCTATGGAAAAAATGGTCAAAGCAAAAAGGGGGAGTACATAAGCAAATTGTTGACGAAAGAAGGAATACAAAACTGAAGCAAGCCAAAATTCAAGAGTTATCTTTGTTTGATTTTAGAAAGTTGGCTACTGCAACAAACAACTTTGACTTGGCAAATAAAATCGGGCAGGGTGGTTTTGGCCCAGTTTACAAGGGAAAGTTGGAAGCTGGACAAGAAATAGCAGTAAAAAGATTGTCAAGATCATCTGGACAGGGTGTGGAAGAATTTATCAATGAAGTGGAATTGATTTCTAAACTTCAACACCGAAACCTTGTTAGACTTCTTGGCTGTTGCATTGAAGAAGAAGAGATATTAGTTTACGAATACTTGCCAAACAAGAGTTTAGATGCTTATATCTTTGATGGAGAGATGAATGCAAAGATATCAGATTTTGGGATGGCTAAACTTTTTGGAGGTGATCAAGATCAAGCTAATACAAAAAGAGTTGTTGGAACATTTGGCTACATTTCTCCCGAATACGCAACTGAAGGATTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTTTGCTACTAGAAATTATTAGTGGAAGAAAAAACACAAGTTTTTATGAAGATGCAGAATGTTTGACACTTTTAGGATTTGCGTGGAAATTATGGATGGATGCCAATGTTATACCTCTAATAGATCCACAAATTTATGATCCAAGCTTTCAGAACGATATATTGAGGTGTATTCATATAGGTCTTTTGTGTGTGCAAGAACTTGCAAAGGACAGGCCCATTATGGCATTTGTAATGTCAATGCTTCAAAGTGAGATTATAGATATTCCTCCACCAAGACAACCTGCATTCATCTTCAGGCAAACAATGTCTTGTGCAGCAAAGAAAGCTCTAGAAAATAATGAGTCATGTTCCATCAATATTGTAACTGTCTCACATTTTGAGGGGAGATAG 2349 0.3895 MIIMFLTGFGSSSCSLLLFFMYLFSFSVLVCALDTVPPSLEIHEPQTIRSNNSMFTLGFFSPENSTNRYLGIWLMSESTIVWVANRDDPVTDSSGILTISENGNLVVLNGQKQVVWSTNVSHIASNSSVQLLDSGNLVLTDRTTGAMVWQSFQHPCDTLLQDIKLSTNQQTGEKVKLTSWKSTSDPSRGRFSLGLEHLNFTQVFIWKENRPHFRSGPWNGTNFLGVPGTSSMIGDGFQVKEDEGIFEISFHFIEKSLLITYDLDSQGKVSEQSWDFQKNAWELRWRIGDSECDFYGKCGPFGICNSQSSPICSCLRGFEPKNKEEWEKQNWTSGCVRREALQCVKNNNGSQATSTTDGFFKLERVKVPDQAESLPYNFRDVVDCRTPCLKSCSCKAYAYDPGLGCMVWSVDLLDILSNSPGGVDLYLRLASSELDTVGRSNMTAPIVISILTGTVVIIASGFFLWKKWSKQKGGVHKQIVDERRNTKLKQAKIQELSLFDFRKLATATNNFDLANKIGQGGFGPVYKGKLEAGQEIAVKRLSRSSGQGVEEFINEVELISKLQHRNLVRLLGCCIEEEEILVYEYLPNKSLDAYIFDGEMNAKISDFGMAKLFGGDQDQANTKRVVGTFGYISPEYATEGFYSEKSDVFSFGVLLLEIISGRKNTSFYEDAECLTLLGFAWKLWMDANVIPLIDPQIYDPSFQNDILRCIHIGLLCVQELAKDRPIMAFVMSMLQSEIIDIPPPRQPAFIFRQTMSCAAKKALENNESCSINIVTVSHFEGR 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci20g0003 782 SMART blect_4 39 155 IPR001480 -
Prci20g0003 782 Gene3D Phosphorylase Kinase; domain 1 472 585 - -
Prci20g0003 782 ProSiteProfiles PAN/Apple domain profile. 343 430 IPR003609 -
Prci20g0003 782 CDD EGF_CA 291 322 - -
Prci20g0003 782 ProSiteProfiles Bulb-type lectin domain profile. 33 152 IPR001480 -
Prci20g0003 782 ProSiteProfiles Protein kinase domain profile. 511 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci20g0003 782 Pfam PAN-like domain 353 415 IPR003609 -
Prci20g0003 782 Gene3D - 28 153 IPR036426 -
Prci20g0003 782 Pfam D-mannose binding lectin 79 181 IPR001480 -
Prci20g0003 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 585 - -
Prci20g0003 782 Pfam Protein tyrosine and serine/threonine kinase 513 595 IPR001245 GO:0004672|GO:0006468
Prci20g0003 782 Pfam Protein tyrosine and serine/threonine kinase 599 672 IPR001245 GO:0004672|GO:0006468
Prci20g0003 782 Gene3D Transferase(Phosphotransferase) domain 1 595 746 - -
Prci20g0003 782 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 725 - -
Prci20g0003 782 CDD B_lectin 46 155 IPR001480 -
Prci20g0003 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 220 IPR036426 -
Prci20g0003 782 SMART ntp_6 354 429 IPR003609 -
Prci20g0003 782 CDD PAN_AP_plant 341 430 - -
Prci20g0003 782 PIRSF SRK 596 782 IPR024171 GO:0004674
Prci20g0003 782 PIRSF SRK 8 599 IPR024171 GO:0004674
Prci20g0003 782 SUPERFAMILY Protein kinase-like (PK-like) 496 754 IPR011009 -
Prci20g0003 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 152 - -
Prci20g0003 782 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci20g0003 435 777 Receptor kinase-like Gene Family AT4G23150 41.944 9.27e-88 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci20g0003 PK_Tyr_Ser-Thr 3.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci20g0003 - - qsa:O6P43_012541 848.58