Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci20g0002 ATGATCATCATGTTTCTTACAGGATTTGGTTCAAGTTCTTGCTCGCTACTCCTCTTTTTTATGTATTTGTTCTCTTTTTCCGTTCTGGTTTGTGCCTTGGACACCGTCCCACCATCTCTAGAGATCCATGAACCCCAAACAATAAGGTCAAATAATAGCATGTTTACTCTAGGATTCTTTAGTCCTGAGAATTCCACGAATCGCTACTTAGGAATCTGGCTTATGTCTGAATCAACTATTGTTTGGGTGGCAAACAGAGACGACCCAGTTACAGATTCTTCTGGGATTCTTACAATATCGGAGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAAGTTGTCTGGTCAACAAATGTCTCACATATTGCATCAAATTCCAGTGTTCAACTCTTGGATTCCGGCAACCTTGTCCTCACTGATAGGACTACCGGAGCAATGGTGTGGCAGAGTTTCCAACATCCCTGTGATACATTATTACAAGACATAAAACTCAGTACTAATCAACAAACAGGCGAGAAAGTGAAACTTACATCATGGAAAAGTACATCTGATCCATCCCGTGGAAGATTTTCTTTAGGTCTAGAGCATCTTAATTTTACTCAAGTGTTCATTTGGAAAGAAAATCGTCCTCACTTTCGTAGTGGTCCTTGGAATGGTACAAACTTTCTTGGGGTACCTGGGACGTCATCTATGATTGGAGATGGCTTCCAAGTGAAAGAAGATGAAGGAATTTTTGAAATTTCTTTTCATTTCATAGAAAAGTCTCTGTTGATAACTTACGATTTAGATTCTCAAGGAAAAGTGTCAGAACAGAGTTGGGATTTCCAGAAAAATGCATGGGAATTGCGGTGGAGAATTGGGGATTCTGAGTGTGATTTTTATGGAAAATGTGGTCCATTTGGGATCTGCAATTCACAGAGCTCCCCAATCTGTAGCTGCTTGAGAGGGTTTGAACCTAAGAACAAAGAAGAATGGGAAAAGCAGAACTGGACCAGTGGATGCGTGAGAAGGGAAGCACTTCAGTGTGTGAAAAACAATAATGGCTCTCAAGCTACTAGCACAACAGATGGGTTTTTCAAGCTGGAGAGGGTGAAAGTACCAGATCAAGCAGAGTCATTACCATATAACTTCAGAGATGTTGTTGATTGTCGAACTCCATGTCTGAAGAGTTGCTCTTGTAAAGCTTATGCATATGACCCAGGCCTTGGCTGTATGGTTTGGAGTGTAGATTTACTTGACATCTTGAGCAATTCACCTGGAGGAGTGGATCTTTACTTACGTTTAGCCTCCTCAGAACTTGTTGGGAGGAGTAACATGACAGCACCAATTGTAATATCAATTCTGACAGGAACAGTTGTCATTATTGCCTCTGGATTTTTCCTATGGAAAAAATGGTCAAAGCAAAAAGGGGGAGTACATAAGCAAATTGTTGACGAAAGAAGGAATACAAAACTGAAGCAAGCCAAAATTCAAGAGTTATCTTTGTTTGATTTTAGAAAGTTGGCTACTGCAACAAACAACTTTGACTTGGCAAATAAAATCGGGCAGGGTGGTTTTGGCCCAGTTTACAAGGGAAAGTTGGAAGCTGGACAAGAAATAGCAGTAAAAAGATTGTCAAGATCATCTGGACAGGGTGTGGAAGAATTTATCAATGAAGTGGAATTGATTTCTAAACTTCAACACCGAAACCTTGTTAGACTTCTTGGCTGTTGCATTGAAGAAGAAGAGATATTAGTTTACGAATACTTGCCAAACAAGAGTTTAGATGCTTATATCTTTGATCCACTGCAACAAAAGCATTTAGATTGGGGGAAGCGCTTCAACATAATAGAAGGAATAGCTAGAGGATTACTTTATCTTCATAGAGATTCAAGATTAAGAATTATACATAGAGATGTAAAAGCTAGTAATATATTGTTAGATGGAGAGATGAATGCAAAGATATCAGATTTTGGGATGGCTAAACTTTTTGGAGGTGATCAAGATCAAGCTAATACAAAAAGAGTTGTTGGAACATTTGGCTACATTTCTCCCGAATACGCAACTGAAGGATTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTTTGCTACTAGAAATTATTAGTGGAAGAAAAAACACAAGTTTTTATGAAGATGCAGAATGTTTGACACTTTTAGGATTTGCGTGGAAATTATGGATGGATGCCAATGTTATACCTCTAATAGATCCACAAATTTATGATCCAAGCTTTCAGAACGATATATTGAGGTGTATTCATATAGGTCTTTTGTGTGTGCAAGAACTTGCAAAGGACAGGCCCATTATGGCATTTGTAATGTCAATGCTTCAAAGTGAGATTATAGATATTCCTCCACCAAGACAACCTGCATTCATCTTCAGGCAAACAATGTCTTGTGCAGCAAAGAAAGCTCTAGAAAATAATGAGTCATGTTCCATCAATATTGTAACTGTCTCACATTTTGAGGGGAGATAG 2484 0.3857 MIIMFLTGFGSSSCSLLLFFMYLFSFSVLVCALDTVPPSLEIHEPQTIRSNNSMFTLGFFSPENSTNRYLGIWLMSESTIVWVANRDDPVTDSSGILTISENGNLVVLNGQKQVVWSTNVSHIASNSSVQLLDSGNLVLTDRTTGAMVWQSFQHPCDTLLQDIKLSTNQQTGEKVKLTSWKSTSDPSRGRFSLGLEHLNFTQVFIWKENRPHFRSGPWNGTNFLGVPGTSSMIGDGFQVKEDEGIFEISFHFIEKSLLITYDLDSQGKVSEQSWDFQKNAWELRWRIGDSECDFYGKCGPFGICNSQSSPICSCLRGFEPKNKEEWEKQNWTSGCVRREALQCVKNNNGSQATSTTDGFFKLERVKVPDQAESLPYNFRDVVDCRTPCLKSCSCKAYAYDPGLGCMVWSVDLLDILSNSPGGVDLYLRLASSELVGRSNMTAPIVISILTGTVVIIASGFFLWKKWSKQKGGVHKQIVDERRNTKLKQAKIQELSLFDFRKLATATNNFDLANKIGQGGFGPVYKGKLEAGQEIAVKRLSRSSGQGVEEFINEVELISKLQHRNLVRLLGCCIEEEEILVYEYLPNKSLDAYIFDPLQQKHLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDVKASNILLDGEMNAKISDFGMAKLFGGDQDQANTKRVVGTFGYISPEYATEGFYSEKSDVFSFGVLLLEIISGRKNTSFYEDAECLTLLGFAWKLWMDANVIPLIDPQIYDPSFQNDILRCIHIGLLCVQELAKDRPIMAFVMSMLQSEIIDIPPPRQPAFIFRQTMSCAAKKALENNESCSINIVTVSHFEGR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci20g0002 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 220 IPR036426 -
Prci20g0002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 152 - -
Prci20g0002 827 PIRSF SRK 8 827 IPR024171 GO:0004674
Prci20g0002 827 CDD EGF_CA 291 322 - -
Prci20g0002 827 ProSiteProfiles Bulb-type lectin domain profile. 33 152 IPR001480 -
Prci20g0002 827 CDD STKc_IRAK 515 780 - -
Prci20g0002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Prci20g0002 827 SUPERFAMILY Protein kinase-like (PK-like) 489 779 IPR011009 -
Prci20g0002 827 SMART ntp_6 354 429 IPR003609 -
Prci20g0002 827 Pfam D-mannose binding lectin 79 181 IPR001480 -
Prci20g0002 827 Pfam Protein tyrosine and serine/threonine kinase 511 717 IPR001245 GO:0004672|GO:0006468
Prci20g0002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Prci20g0002 827 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Prci20g0002 827 ProSiteProfiles Protein kinase domain profile. 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci20g0002 827 SMART blect_4 39 155 IPR001480 -
Prci20g0002 827 ProSiteProfiles PAN/Apple domain profile. 343 430 IPR003609 -
Prci20g0002 827 Gene3D - 28 153 IPR036426 -
Prci20g0002 827 Pfam PAN-like domain 353 415 IPR003609 -
Prci20g0002 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 770 - -
Prci20g0002 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci20g0002 827 CDD B_lectin 46 155 IPR001480 -
Prci20g0002 827 SMART serkin_6 509 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci20g0002 827 Gene3D Transferase(Phosphotransferase) domain 1 584 785 - -
Prci20g0002 827 Gene3D Phosphorylase Kinase; domain 1 470 583 - -
Prci20g0002 827 CDD PAN_AP_plant 341 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci20g0002 440 794 Receptor kinase-like Gene Family AT4G23230 52.809 2.05e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci20g0002 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci20g0002 - - qsa:O6P43_012541 948.732