Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci209g0006 ATGGATGGAGAGAATAAGAGCGGTGGAGACGGCGGAGATGCCCCGATGGCGGCTCCGGCGCCGGCGCCCATTTCTACTGTGAACGCTCCACCACCGTTCCTTAGTAAGACGTATGACATGGTGGATGACCCGGCCTCTGATGCGATCGTGTCTTGGAGCCCAACCAACAATAGCTTTGTGGTTTGGAACCCTCCAGAGTTTGCCAGAGATCTCTTGCCTAAGTACTTCAAGCACAATAATTTCTCCAGCTTTGTGAGGCAGCTGAACACTTATGGTTTTCGAAAGGTGGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTAAGGGGTCAGAAGCACTTGCTTAAGAGTATTACTCGACGAAAACCTGCCCATGGCCATAATAATCAACAAGTACAGCAGTCACAAGGACATAGTTCTTCAGTAGGGGCATGTGTAGAAGTGGGGAAGTTTGGACTTGAAGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACCACTGATAACCGGCTGCAGACAATGGTTCAGCGCCTTCAAGGAATGGAACAACGACAACAGCAAATGATGTCATTCCTTGCCAAGGCTGTACAGAGCCCTGGCTTTTTTGCTCAGTTTGTGCAACAGCAAAACGAGAGCAATAGACGCATAACTGAAGCCAACAAAAAACGGCGGCTTAAGCAGGAAGGTATTGCTGAAACAGAGTGTACTCCTTCTCCTGATGGACAAATTGTTAAGTATCAACCTCTTATGAATGAAGCGGCAAAAGCAATGCTAACGAAGATAATGAAATTGGATAGTTCACAGCTGGAATCTTTTAATAACAACCTTGATAACTACTTGATTGGGGATGGATCATCATCATCCAGTGCAATGGACAGCAGTAGCTCTTCAAGCTGGACTTCTGGAGTTACACTCCAAGAGGTCCAACCAACTTCAGTGCAGTCTTCTCACATTCCAGCTGCATCAGGAGCTTCAGGGCCCTTAGCTGACAAATCTGAAATCCCATCTACAAAAACTGCACCTGCTGTCTCTGCTTCTCAGGTAGGCGTCATAATACCTGAGCTTTCGCCCATACCAGAGATGGTGACAGAAAATGTTCTTGAAGAAAATTATGTCAGATCTGCGATGGACAATTCAGATCCTACTTCATTGGGACTGAATGAGTCATTGACCCCTGATGTTGGTAGCATTTCTCCTGATGCAGACATTGATGATTTGTTACGCAATCCTTCCTTTTGGGATGATTTTCTTTTGCAAAGTCCATTACCTGAGGATATTGAGATCATTGCTGCTGAAGCAGTGTCCAATGAGGTGCAGCCAATGGAAGACGGTTGGGACAAAGCTGAACACATGAGCCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGATCCAAGAGCAGGTTGA 1452 0.4621 MDGENKSGGDGGDAPMAAPAPAPISTVNAPPPFLSKTYDMVDDPASDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHNNQQVQQSQGHSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNRLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNESNRRITEANKKRRLKQEGIAETECTPSPDGQIVKYQPLMNEAAKAMLTKIMKLDSSQLESFNNNLDNYLIGDGSSSSSAMDSSSSSSWTSGVTLQEVQPTSVQSSHIPAASGASGPLADKSEIPSTKTAPAVSASQVGVIIPELSPIPEMVTENVLEENYVRSAMDNSDPTSLGLNESLTPDVGSISPDADIDDLLRNPSFWDDFLLQSPLPEDIEIIAAEAVSNEVQPMEDGWDKAEHMSQLTEQMGLLSSDPRAG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci209g0006 483 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 SUPERFAMILY "Winged helix" DNA-binding domain 29 122 IPR036390 -
Prci209g0006 483 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 MobiDBLite consensus disorder prediction 300 355 - -
Prci209g0006 483 FunFam Heat shock transcription factor 1 26 123 - -
Prci209g0006 483 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 MobiDBLite consensus disorder prediction 1 29 - -
Prci209g0006 483 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci209g0006 483 Gene3D - 26 123 IPR036388 -
Prci209g0006 483 MobiDBLite consensus disorder prediction 300 336 - -
Prci209g0006 483 Coils Coil 151 178 - -
Prci209g0006 483 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 308 IPR027725 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci209g0006 8 477 HSF AT1G32330 54.620 1.07e-166 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci209g0006 HSF_DNA-bind 3.1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci209g0006 K09419 - gmx:100815121 629.402