Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci209g0005 ATGAGCTTTCAGGATATCGAAGCCGGCCGGCCTTTCGCTCCGAGGCGAGACCTAATCAATGGCAAGCAAGACCCTACACAGGCCGTGGCGTCCGGTGTATTTCAGATCAACACAGCCGTGTCAACGTTTCAGAGGCTCGTCAACACCCTTGGAACCCCGAAAGACACGCCCGAGCTTCGCGAGAAGCTGCACAAAACAAGACTACATATTGGGCAATTGGTGAAGGACACATCAGCTAAACTTAAGCAAGCTAGTGAAATAGATCACCATGGTGAAGTTAATGCAAGCAAGAAGATAGCGGATGCCAAACTTGCAAAAGACTTTCAGGCAGTATTGAAAGAGTTTCAGAAGGCCCAACGGCTTGCAGCTGAGAGGGAAACAGCTTACACTCCTTTCGTTCCACAAGCAGTTCTTCCCTCAAGCTATACAGCTAGTGAGATAGATGTCTCCAGTAAGAGCCAAGAACAGCGGGCTCTTCTTGTTGAATCCAGAAGGCAGGAGGTCTTGATGTTGGATAATGAGATTGTATTTAATGAGGCTATCATTGAGGAAAGGGAGCAAGGCATTCAAGAAATCCAGCAGCAAATTGGCGAAGTAAATGAGATCTTCAAAGATCTTGCTGTGCTTGTTCATGAGCAAGGAACCATGATTGATGATATTGGCTCCAACATTGAGAACTCACATGCAGCAACTGCGCAAGCAAAATCTCATCTGGTGAAAGCTGCAAAGACCCAAAGATCGAATTCATCTCTGACTTGCTTACTCTTGGTGATCTTTGGAATTGTGCTTCTCATCGTGATCATTGTCCTTGCGGCTTAG 819 0.4652 MSFQDIEAGRPFAPRRDLINGKQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASEIDHHGEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDVSSKSQEQRALLVESRRQEVLMLDNEIVFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSHLVKAAKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci209g0005 272 SMART SynN_4 15 127 IPR006011 GO:0016020
Prci209g0005 272 CDD SynN 23 155 IPR006011 GO:0016020
Prci209g0005 272 FunFam Syntaxin-22 like 172 272 - -
Prci209g0005 272 ProSitePatterns Syntaxin / epimorphin family signature. 185 224 IPR006012 GO:0005484|GO:0006886|GO:0016020
Prci209g0005 272 Gene3D - 176 272 - -
Prci209g0005 272 SMART tSNARE_6 174 241 IPR000727 -
Prci209g0005 272 Pfam SNARE domain 215 267 IPR000727 -
Prci209g0005 272 Gene3D - 20 133 - -
Prci209g0005 272 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 179 241 IPR000727 -
Prci209g0005 272 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Prci209g0005 272 PANTHER SYNTAXIN 27 264 IPR045242 -
Prci209g0005 272 FunFam Syntaxin-22 like 20 133 - -
Prci209g0005 272 CDD SNARE_Qa 199 240 - -
Prci209g0005 272 SUPERFAMILY t-snare proteins 23 234 IPR010989 GO:0016020|GO:0016192
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci209g0005 1 260 SNARE and Associated Proteins AT5G46860 78.846 1.12e-148 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci209g0005 - - gmx:547656 424.091