Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2095g0003 ATGGGTTGTATATGCTCGAAAGGGAAATCTTCAGATGATTACGTTGCTGAGAACCATACCAGAGACAAGGATACGAAGGCTAATAGAATCTCAAAACATTTGAGTTCGGGAGAGAAGGTAGCAATAGAGGCTGATGGTAGTGGTAATGATGCGACTACACGGTTGATATCTAATCCGTCTCGGGATGGAACTTCAGGGTCCACTTCCGTTTCATCAGATGAGGGGGAGAAGAACGGAGAAACAGAGACTACTGCAAAGCCTGCAAAACAACTGGTTCATATGGCCTCAAACATGGGAATTGGAAATGGAGGACAAGGACAACCTAAGATGGCTAGGATAGTTACCGTACCTAAAGGGGAAAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCAGGGGAAGCCATTAATGGGTGGATACCTCGCAGAGCAGACGCATATGAGAAGTTGGAAAAGATTGGGCAGGGAACTTACAGCAGTGTTTACAGAGCTCGTGATCTTGAAACAAGCAAAATTGTTGCATTGAAGAAGATTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATTATTGTACTGCGGAGGCTTGATCATCCAAATGTCATGAAACTTGAAGGCATCATTACTTCACGGGTATCAGGTAGCTTGTACCTCGTTTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTGGCATCAAGTTCACTGAAGGGCAGATCAAATGTTACATGCAACAGCTGCTTTGTGGTATTGAGCACTGCCACAGTCATGGTGTTCTGCATCGAGACATCAAGGGCTCAAATCTTCTGATTGACAAGAATGGCATTCTAAAGATTGGTGATTTTGGGCTAGCAACTTTCTTTGAGCCTTCTAAGGCTCAGGTTTTGACAAGTCGTGTGGTTACCTTGTGGTACCGACCACCGGAACTCCTACTGGGAGCCACAAATTATGGAGTTGCGGTGGACTTGTGGAGTGCTGGTTGCATTCTTGCAGAGTTGTTTGCCGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCACAAAATCTTCAAACTCTGTGGATCACCATCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAACCTCAACATCCCTACAAACGTATTGTTGCTGAGACATTTAAGGATTTTCCTCCATCAGCATTAAGCCTTTTGGAAGTCCTCCTTGCTATTGAACCAGAGGATCGAGGAACTGCTTCTTTAGCACTTCAGAGCGAGTTCTTTGCAACTAAGCCCCTTCCTTGTGATCCTTCAACTTTGCCAAAATATCCACCAAGTAAGGAGTTTGATGTCAAGATTCGACAAGAAGAAGCCAGAAGACGAAGAGCAGCAAATAATAAAAGAAATGCAGAGGAATCAGCTAGCAAGGTTTCCAAAGAATCTAAAGCTGTTCCAGCACCTGATGCTAATGCTGAGTTACGGTCATCAATTGAGAAGAGACAAGGGCAGGCTAACCCTAAATGTATCAGTGAGAAGTTCAATCCTGATGAGGATGGTGGTTCTGGCTTCCCTATTGAACCTTCAAAGACAAGAGCACTTAATGCTTTCTCTCATTCTGGTCAGTCCATGCATCCAAGTGTCTATGGATCTTCACGCAATATGAATTCAAACAAGGAAGAGTCTGTTGCTGGCCCTGGTCATGTGTATGATTCGGGAAATCCTGTGGGGTTGAGAAAACAGAGATCCTACATGAACAGGAATGCTGCCCAATTGTCAAGATTTTCTAATTCAGTTGCCAATGAAGGTGGTTTAAAGCTTGATATGAGTGGAGATGCTAGTGTGAGTTCACAGTGGCCAGATGATTGCTTTGGCACACGATATGACCATCTTGTTGATGACGAATCCAACCAATTGCTCAAGTCTTTACACAAGAAGGACATACATCCTTGCGCAAAGGAGCCTTCCAAGGCATTTGCCCCAAAAAATGGTCAAATATACTATTCAGGACCGCTAGTCCCTGGAGGTGAAAATCTCGATGAAATACTTAAGGAGAATGAAAAGCAAATCCAGCAAGCAGTCCGCAAGGCACGCTTGGATAAGGTCAAGATAAGTAAGTGTGACAGTGACAATGGCCAAACTGAATCTCTACTTCACCATGTTGGAAATCGATAG 2196 0.4399 MGCICSKGKSSDDYVAENHTRDKDTKANRISKHLSSGEKVAIEADGSGNDATTRLISNPSRDGTSGSTSVSSDEGEKNGETETTAKPAKQLVHMASNMGIGNGGQGQPKMARIVTVPKGERGAQVLAGWPSWLTAVAGEAINGWIPRRADAYEKLEKIGQGTYSSVYRARDLETSKIVALKKIRFANMDPESVRFMAREIIVLRRLDHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLSATPGIKFTEGQIKCYMQQLLCGIEHCHSHGVLHRDIKGSNLLIDKNGILKIGDFGLATFFEPSKAQVLTSRVVTLWYRPPELLLGATNYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRIVAETFKDFPPSALSLLEVLLAIEPEDRGTASLALQSEFFATKPLPCDPSTLPKYPPSKEFDVKIRQEEARRRRAANNKRNAEESASKVSKESKAVPAPDANAELRSSIEKRQGQANPKCISEKFNPDEDGGSGFPIEPSKTRALNAFSHSGQSMHPSVYGSSRNMNSNKEESVAGPGHVYDSGNPVGLRKQRSYMNRNAAQLSRFSNSVANEGGLKLDMSGDASVSSQWPDDCFGTRYDHLVDDESNQLLKSLHKKDIHPCAKEPSKAFAPKNGQIYYSGPLVPGGENLDEILKENEKQIQQAVRKARLDKVKISKCDSDNGQTESLLHHVGNR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2095g0003 731 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 1 88 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 540 568 - -
Prci2095g0003 731 Coils Coil 683 703 - -
Prci2095g0003 731 Gene3D Transferase(Phosphotransferase) domain 1 240 476 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 467 585 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 50 74 - -
Prci2095g0003 731 Coils Coil 461 488 - -
Prci2095g0003 731 SMART serkin_6 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2095g0003 731 FunFam probable serine/threonine-protein kinase At1g54610 139 234 - -
Prci2095g0003 731 Pfam Protein kinase domain 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2095g0003 731 ProSiteProfiles Protein kinase domain profile. 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2095g0003 731 SUPERFAMILY Protein kinase-like (PK-like) 146 444 IPR011009 -
Prci2095g0003 731 CDD STKc_CDK9_like 152 436 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 467 486 - -
Prci2095g0003 731 MobiDBLite consensus disorder prediction 12 39 - -
Prci2095g0003 731 FunFam probable serine/threonine-protein kinase At1g54610 235 476 - -
Prci2095g0003 731 PANTHER CELL DIVISION PROTEIN KINASE 150 442 - -
Prci2095g0003 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Prci2095g0003 731 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2095g0003 144 487 Core Cell Cycle Gene Families AT5G10270 50.276 7.35e-117 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci2095g0003 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2095g0003 - - qsa:O6P43_031464 1011.52