Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2092g0001 ATGTCTATCATCATTTTCATGCTGTGTTTGTACCTGAACATAGCATATTCAGACGAAAATGTGAATAATGTTGGATTCAGGTATGATGGATACTTCAAGTTGAGTGCAGGCAGTGAGCAAGAGCTCAGACATTCGAATCTGACGGCTAAAGCAATATATGCCGATAGTGGCCTTAGTGAAGCATCGCAAGTCTTTTACAATCTTCCTCTTCGATTCAAGAATTCCAACGCCACTCCTTCTGTCTTCTCTTTCTCTACCACTTTCATCTTTGCAATAGTAGCCACTGATCCTGAATTTCACGGCCATGGACTCGCCTTAGCTATCTCGCCGACTAGAGGTATTCCTCAAGCTCAGCCAAACCAGTATCTTGGCCTATTCAATGCTACCAACAATGGTGAAAGTTACAATCATATTGTTGCAATAGAGCTTGATACTGATGAGGATTTTCAGTTTCATGATATTGATGATAACCATCTTGGAATTGATATAAATGGGTTGGACTCTGTCAATAGTTCTTCAGCGGCATACTATAATGATCGTGGTCGTCTCAGAAAGCTAGATCTTACAAGTGGAGAACCGATGCAGGTTTGGGTTGAATACGACAGTAAAGATCATAAACTCAGTGTCACAATTCATCCCATAAACATACCTAAACCTGAGATTCCTCTTCTCACACTGAAAACAGATCTTTCTTCTATTTTCTCTGAGTTTATGTTTGTTGGGTTCTCATCCTCTACCGACTCAAATTCATCTCATTACATATTGGGTTGGAATTTCAGGATGAACGGTCAAGCTGAGGAGATTAATCTTTCTCGCCTTCCTGACATTCCTGGGATTTTAGATCCAAATGAAATCGGCGGAGGGAAAGGATACAAGAAAGTTTTGATAGTTATATCACCGCTAGTAGTAGGTGTGGTTTTCCTTCTAATCTTGATTTATGGTGCGATCATGATCTCGAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAATCTTGTATGGGCCTCATAGGTTCACTTACAAGGACTTGTTCATTGCAACAAAAGGGTTTAGAGATGGACAACTTCTTGGCAGAGGAGGTTTTGGAAGAGTATACAGAGGAACTCTACCATTTTCCAATGTTCAAATTGCAGTAAAAAGAATTTCTCATGATTCAAGACAAGGAATGAAAGAATTCATAGCAGAAATCGCAACCATCGGTCGTCTCAGGCATCCAAACTTGGTAAGGCTTCTTGGCTATTGCAGAAGAAAAAATGAACTCCTCTTAGTCTATGACTACATGCCTAATGGAAGTCTAGACAAGTTCCTCTACCGCATGCCAAACAGCATACTCAGCTGGAAACAAAGATTCAAGATCATAAAAGATGTGGCATCTGGACTCTTGTATCTTCACCAGCAATGGGTTCAAGTCATCGTCCACAGAGACATCAAACCAGCCAATGTTCTGATTGACAATGACATGAATGCTAGACTGGGAGATTTCGGCCTTGCCAAGCTATGGGACCATGGAAATGATCCTCAAACATCTCATGTGGCAGGAACTCCGGGCTACATAGACCCAGAAATTGTGCAGAGTGGAAAATCAAGCACGTGTACTGATATATATTCATTTGGGGTGTTTCTGTTGGAGGTTGCTTGCGGTAGAAGGCCGATCGAAACTCAAACTTCGCCGGAGAAAGTATTGCTGTTAGAATGGGTTATGGTGTGTTTGGATAAGGGAGACATATGTGAAGCAGTGGACAGCAGATTGGGGGATGAATATGTTGTGGAAGAAGCTGATTTGGTGCTCAAACTTGGGTTGCTCTGCTCACACCCTGTTGCTTCAGCTAGGCCTACGATTTCTACTATAGTGCAAATTTTTGATGGAGATTCTCAGTTGCCTGATAACTTATCAGACTTAATGAAGTTTAGAAAAGTTGGAGGCTGGTCAGGTCAAGGATGTTCTTCATCATTCTCCACCTTTCCTACTGGGCAGACTTCTATTGCTTCAATCACTTTTACAGAACCATTTGCCTCTGATGGCCGCTAG 2034 0.4164 MSIIIFMLCLYLNIAYSDENVNNVGFRYDGYFKLSAGSEQELRHSNLTAKAIYADSGLSEASQVFYNLPLRFKNSNATPSVFSFSTTFIFAIVATDPEFHGHGLALAISPTRGIPQAQPNQYLGLFNATNNGESYNHIVAIELDTDEDFQFHDIDDNHLGIDINGLDSVNSSSAAYYNDRGRLRKLDLTSGEPMQVWVEYDSKDHKLSVTIHPINIPKPEIPLLTLKTDLSSIFSEFMFVGFSSSTDSNSSHYILGWNFRMNGQAEEINLSRLPDIPGILDPNEIGGGKGYKKVLIVISPLVVGVVFLLILIYGAIMISRRRKFIQVLEDWQILYGPHRFTYKDLFIATKGFRDGQLLGRGGFGRVYRGTLPFSNVQIAVKRISHDSRQGMKEFIAEIATIGRLRHPNLVRLLGYCRRKNELLLVYDYMPNGSLDKFLYRMPNSILSWKQRFKIIKDVASGLLYLHQQWVQVIVHRDIKPANVLIDNDMNARLGDFGLAKLWDHGNDPQTSHVAGTPGYIDPEIVQSGKSSTCTDIYSFGVFLLEVACGRRPIETQTSPEKVLLLEWVMVCLDKGDICEAVDSRLGDEYVVEEADLVLKLGLLCSHPVASARPTISTIVQIFDGDSQLPDNLSDLMKFRKVGGWSGQGCSSSFSTFPTGQTSIASITFTEPFASDGR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2092g0001 677 Gene3D Transferase(Phosphotransferase) domain 1 429 637 - -
Prci2092g0001 677 FunFam L-type lectin-domain containing receptor kinase V.9 45 264 - -
Prci2092g0001 677 FunFam L-type lectin-domain containing receptor kinase S.4 429 635 - -
Prci2092g0001 677 CDD lectin_legume_LecRK_Arcelin_ConA 47 263 IPR001220 GO:0030246
Prci2092g0001 677 ProSiteProfiles Protein kinase domain profile. 352 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2092g0001 677 SMART serkin_6 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2092g0001 677 Gene3D - 14 274 - -
Prci2092g0001 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 265 IPR013320 -
Prci2092g0001 677 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Prci2092g0001 677 Pfam Legume lectin domain 59 273 IPR001220 GO:0030246
Prci2092g0001 677 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Prci2092g0001 677 FunFam Lectin-domain containing receptor kinase A4.3 337 428 - -
Prci2092g0001 677 SUPERFAMILY Protein kinase-like (PK-like) 334 630 IPR011009 -
Prci2092g0001 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Prci2092g0001 677 CDD STKc_IRAK 358 624 - -
Prci2092g0001 677 Pfam Protein kinase domain 353 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2092g0001 677 PANTHER - 49 626 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2092g0001 63 677 Receptor kinase-like Gene Family AT4G29050 56.200 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci2092g0001 Pkinase 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2092g0001 - - pcin:129301411 1362.82