Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2079g0002 ATGATTGGAACTGAAACTGCTGAATCAAATTATGGTCATAATCATTCCCAAATGAAGGAAACTGAAAGCATGCAGTTTGACTATGATGGGAAACAATCTGTTCAGATCGCTTTTCTTTTGACACATATTTTTATGGCTTCATCTAGGATGGAGATGTTGATCAATACCTTTCAGTTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGCGGGGGACCGATGTTGCCATTAAAAGAATCAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAAAGACTGACTCTAGAGTTCTGGCGCGAAGCTGACATACTTTCCAAACTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTTCAGGATGGACCTGGTGGAACAATGGCCACTGTTACTGAATTCATGGTGGATGGTTCGCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTAGGAAGAGGCTGATAATTGCCATGGATGCTGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACATGAAAGATCCTTTACGGCCAATCTGCAAGGTTGGAGATTTTGGGTTGTCAAAAATCAAAAGAAATACCCTGGTATCCGGTGGTGTGCGAGGAACCTTGCCATGGATGGCGCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTATTCTCCTTTGGCATAGTATTATGGGAGATTCTAACGGGTGAGGAGCCGTATGCCAATATGCACTATGGTGCAATTATAGGTGGGATAGTAAATAACACATTAAGGCCAACAATCCCAAGTAATTGTGATTTGGAATGGAGAACACTAATGGAGCAATGTTGGGCGCCGAATCCTGCAGCCCGGCCGTCCTTCTCCGAAATCACTCGTCGCTTGCGTGTAATGTCAGCAGCAGCGAATCAATCCAAAGCACAAGGCCACAAAGCAGCTAAATGA 1044 0.4272 MIGTETAESNYGHNHSQMKETESMQFDYDGKQSVQIAFLLTHIFMASSRMEMLINTFQFIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDLEWRTLMEQCWAPNPAARPSFSEITRRLRVMSAAANQSKAQGHKAAK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2079g0002 347 ProSiteProfiles Protein kinase domain profile. 65 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2079g0002 347 PANTHER SERINE-THREONINE PROTEIN KINASE 43 329 - -
Prci2079g0002 347 PRINTS Tyrosine kinase catalytic domain signature 299 321 IPR001245 GO:0004672|GO:0006468
Prci2079g0002 347 PRINTS Tyrosine kinase catalytic domain signature 184 202 IPR001245 GO:0004672|GO:0006468
Prci2079g0002 347 PRINTS Tyrosine kinase catalytic domain signature 147 160 IPR001245 GO:0004672|GO:0006468
Prci2079g0002 347 PRINTS Tyrosine kinase catalytic domain signature 255 277 IPR001245 GO:0004672|GO:0006468
Prci2079g0002 347 SMART serkin_6 65 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2079g0002 347 Gene3D Phosphorylase Kinase; domain 1 58 152 - -
Prci2079g0002 347 Pfam Protein tyrosine and serine/threonine kinase 66 328 IPR001245 GO:0004672|GO:0006468
Prci2079g0002 347 CDD STKc_MAP3K-like 71 328 - -
Prci2079g0002 347 Gene3D Transferase(Phosphotransferase) domain 1 153 347 - -
Prci2079g0002 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Prci2079g0002 347 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 58 152 - -
Prci2079g0002 347 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 153 345 - -
Prci2079g0002 347 PIRSF ILK 41 345 - -
Prci2079g0002 347 ProSitePatterns Protein kinases ATP-binding region signature. 71 96 IPR017441 GO:0005524
Prci2079g0002 347 SUPERFAMILY Protein kinase-like (PK-like) 41 327 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2079g0002 17 347 MAP Kinase Kinase Kinase AT1G16270 78.324 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci2079g0002 PK_Tyr_Ser-Thr 5.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2079g0002 - - pcin:129301387 695.271