Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci206g0006 ATGACATTATATAGGCTTCTCGCTTTCCTCCTGCTGTTTCTCCAACTTCACTTTCAAGGCATCCTCTGTGATGACAAAGATGCCCTCCTTTCATTCAAATCCCAAGTCACTGATCCAAAGAATTCTCTCTCTGGCTGGAATTCTAATTCCTCCATCTGCTCTTGGTATGGACTCTCCTGCACCAGAAACACTAACAGAGTTCAATCTCTCAGTCTACCAGGATTAGGCCTTTCTGGTAATCTACCCTCTTCCCTCTCCAATCTTACTCATTTACAATCACTTGATCTTTCCAGTAATGCATTCCAGGGCCGTCTTCCTTTGGAGCTCTCGAATCTCTCTCTTCTTAATACCATCAATTTAGCTGCCAACAATCTCATTGGTACCCTTCCTTGGCAATTATCCCTTCTAAACCAGCTTCAAGTTCTGGACTTCTCTTCGAATAATTTCACTGGTCAAATCCCTCCTGAATTTGGAAACTTTTCTTCTCTCAAAAACCTTTCCTTGGCAAGAAACCATCTTTCTGGGGAGATTCCCAGTGATTTAGGAAATCTTCGTAATCTTTCTCATCTTCAACTCTCTCAGAACTATTTCTCTGGGGACTTTCCCATTACTATCTTCAACATCTCTTCGTTAACCTTTTTATCTGTAACACAAAATCACTTTTCAGGAAAATTACCACAAGATATTGGCGATTCTCTCCCTAATCTCCGAAGTCTCTATTTAGCTGACAATATGTTTGGTGGTGTGATTCCTGATTCCATATCCAATGCTTCACATATCCAAGACCTCGATCTTTCTCACAATCAATTCCATGGATACCTTCCCCTGTTCAGCAACATGAGAAATCTCACCTGGCTAATTCTCAGTAACAACCATCTCTCTTCCAGAACATCAAATAATTCTGATTTCTTTGATTACCTTATACATAGCCCAAAGTTGAAAATTCTGATGATCGACTCTAATCAGTTAGCAGGGGAGCTTCCAAGATCTATAGCAAATCTTTCAACCACTCTAGAACAATTTTGTGTATCTAATAACTTTTTCAGTGGAAGTATCCCTCAAGGTATAGGAAAATTTCAAAACCTCGTGTCCCTATCTTTTGAAAATAATCATTTCACTGGGGAGAAACCAAGAGACATAGGAGCATTGAATAAACTGGTGCAACTTCTTGCATACAAAAACAAGTTTTCAGGAGAAATCCCAGACATGTTTGGGAATTTCACTCAACTATCAATGCTTGCATTGCATAATAACAAGTTGTTTGGCAGAATTCCCTCCAGCATTGGACAATGCGAAAGGTTGAACTATTTGAACCTTCAAATGAATAACCTTCATGGGACCATACCAGAGGGTATTTTTAGGCTTTCTAGTTTAACCACATTGTCCTTAGCTGGGAATACCCTGCATGGGTTCCTCCCTTCTAAAGTGAGCTCCATGGAGCAACTTCAGTTCTTGGACATGTCTAATAATCTAATGACCGGATATATTCCCGAAGAAATAGATGGCTGCACAAGCTTGCGGATGCTTCAATTGGCAAGAAACAAATTTAGTGGTCCAGTACCAAGTACTTTGGGGAATCTAACGTCATTGGAAACGTTGGATTTATCTTCAAACAACCTCTCAGGTCCCATCCCTTCAACTTTGGAAAAGCTTCGGTATATGGTGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGGGAAGTTCCCGTGGAAGGTGTTTTTACCAACCTTACCCAGGTTACTCTCCTAGAAAACAGCAACCTTTGCAGTCCTAACAAAGAAGTTGCGGAAAGATTAAGAATCATTGCATGTGTCAAAGGTAAAAGGCACAGATTCTTACTCCCTCTCATACTTGCAGTAACAGTTGCTTCTATTTTTTGCATTTCCATCTGCTTAGTGTGGGTGAAATGGTTCCGAAAGAAGGAAAAGAAGAATGATAAAACAAGTTTGTCGATTTCTCCTCTCAAGGGAGCTCCTCAAAATATATCGTTCTCTGATATTCGAGCTGCCACAAAAAATTTCGCATCCGAAAACTTGATAGGAAATGGTGGATTTGGCTTTGTCTACAAGGGTGTGTTCAGCATCGACCAATGTGAAACTACTCTCGCCGTGAAAGTGCTCGACTTGAAACAAAGCAAGGCTTCTCAAAGTTTCAGTGCAGAGTGTGAAGCCTTGAAGAACGTTAGGCACAGGAACCTCGTGAAGCTCGTCACTTCTTGCTCTAGTATTGATTATAAAGGTGATGACTTCAAAGCCTTGGTTATGCAATTCATGACCAACGGTAATTTGGACACATGGCTGTATCCAGTGGACGAAGAATCAGGGTCCTCCTTGAGCTTCTTGCAGAGATTGAATATTGCTATAGACATTGCTAACGCAATGGACTATTTACACCATGACTGTAACCCACCAGTAGTCCATTGCGATCTAAAACCTGGTAATGTCTTGTTAGATGAAAATATGGTGGGCCATGTAGGAGATTTTGGCCTGGCAAGGCTTCTTTCCCAGGATTTATTAGAGTCCGTCACCCTAGGACTGAAGGGTACCATCGGCTACATTCCCCCAGAATATGGCCTAGGTGGCAAAGCTTCAACCTTGGGAGATGTGTACAGCTTTGGGATTTTACTTCTCGAGATGTTCATAGCAAAAAAGCCAACTGATGAGATGTTCAAGGAAGGATTAAGCCTTGAAAAATTTGCATCGGCAATGGATGAGAATCAATTAGTGAATGCAGTTGATCCAAAGCCTTTTAACGATTTTGAATGGTCAACACAAAGCTCAAGCACTGGCTATCCTAGTGAAGGCACTAGTGACAACTTTAATAGTGGTCTCACGTTGCGCCAGAGCAAATCAGAGGAGTGTGCAGCTGCAGTGATAAGAACTGGCTTGTCTTGTGCAGCTGAAGTGGCCACAAATCGCTTGACCATGAGACAGGCCTCAAAACAATTACAAGGAATCAGGCAGACTCTGCTGGCTATATGA 2982 0.4148 MTLYRLLAFLLLFLQLHFQGILCDDKDALLSFKSQVTDPKNSLSGWNSNSSICSWYGLSCTRNTNRVQSLSLPGLGLSGNLPSSLSNLTHLQSLDLSSNAFQGRLPLELSNLSLLNTINLAANNLIGTLPWQLSLLNQLQVLDFSSNNFTGQIPPEFGNFSSLKNLSLARNHLSGEIPSDLGNLRNLSHLQLSQNYFSGDFPITIFNISSLTFLSVTQNHFSGKLPQDIGDSLPNLRSLYLADNMFGGVIPDSISNASHIQDLDLSHNQFHGYLPLFSNMRNLTWLILSNNHLSSRTSNNSDFFDYLIHSPKLKILMIDSNQLAGELPRSIANLSTTLEQFCVSNNFFSGSIPQGIGKFQNLVSLSFENNHFTGEKPRDIGALNKLVQLLAYKNKFSGEIPDMFGNFTQLSMLALHNNKLFGRIPSSIGQCERLNYLNLQMNNLHGTIPEGIFRLSSLTTLSLAGNTLHGFLPSKVSSMEQLQFLDMSNNLMTGYIPEEIDGCTSLRMLQLARNKFSGPVPSTLGNLTSLETLDLSSNNLSGPIPSTLEKLRYMVKLNLSFNHLEGEVPVEGVFTNLTQVTLLENSNLCSPNKEVAERLRIIACVKGKRHRFLLPLILAVTVASIFCISICLVWVKWFRKKEKKNDKTSLSISPLKGAPQNISFSDIRAATKNFASENLIGNGGFGFVYKGVFSIDQCETTLAVKVLDLKQSKASQSFSAECEALKNVRHRNLVKLVTSCSSIDYKGDDFKALVMQFMTNGNLDTWLYPVDEESGSSLSFLQRLNIAIDIANAMDYLHHDCNPPVVHCDLKPGNVLLDENMVGHVGDFGLARLLSQDLLESVTLGLKGTIGYIPPEYGLGGKASTLGDVYSFGILLLEMFIAKKPTDEMFKEGLSLEKFASAMDENQLVNAVDPKPFNDFEWSTQSSSTGYPSEGTSDNFNSGLTLRQSKSEECAAAVIRTGLSCAAEVATNRLTMRQASKQLQGIRQTLLAI 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci206g0006 993 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Prci206g0006 993 Gene3D Ribonuclease Inhibitor 178 275 IPR032675 -
Prci206g0006 993 PRINTS Leucine-rich repeat signature 527 540 - -
Prci206g0006 993 PRINTS Leucine-rich repeat signature 482 495 - -
Prci206g0006 993 ProSiteProfiles Protein kinase domain profile. 674 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci206g0006 993 Gene3D Phosphorylase Kinase; domain 1 635 757 - -
Prci206g0006 993 SUPERFAMILY L domain-like 337 592 - -
Prci206g0006 993 SUPERFAMILY L domain-like 22 295 - -
Prci206g0006 993 FunFam Leucine-rich repeat receptor protein kinase EMS1 201 299 - -
Prci206g0006 993 Gene3D Ribonuclease Inhibitor 276 597 IPR032675 -
Prci206g0006 993 Pfam Leucine Rich Repeat 529 551 IPR001611 GO:0005515
Prci206g0006 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 300 609 - -
Prci206g0006 993 SMART LRR_typ_2 280 302 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 160 184 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 407 431 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 455 479 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 88 112 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 136 159 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 527 551 IPR003591 -
Prci206g0006 993 SMART LRR_typ_2 233 257 IPR003591 -
Prci206g0006 993 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Prci206g0006 993 Pfam Leucine rich repeat 234 293 IPR001611 GO:0005515
Prci206g0006 993 ProSiteProfiles Leucine-rich repeat profile. 529 552 IPR001611 GO:0005515
Prci206g0006 993 SMART serkin_6 674 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci206g0006 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Prci206g0006 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 758 993 - -
Prci206g0006 993 PANTHER OS04G0122200 PROTEIN 175 986 - -
Prci206g0006 993 Pfam Leucine Rich repeat 88 102 IPR001611 GO:0005515
Prci206g0006 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 181 - -
Prci206g0006 993 Gene3D Transferase(Phosphotransferase) domain 1 758 991 - -
Prci206g0006 993 Pfam Protein tyrosine and serine/threonine kinase 677 892 IPR001245 GO:0004672|GO:0006468
Prci206g0006 993 SUPERFAMILY Protein kinase-like (PK-like) 649 979 IPR011009 -
Prci206g0006 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 644 757 - -
Prci206g0006 993 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Prci206g0006 993 ProSitePatterns Protein kinases ATP-binding region signature. 680 705 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci206g0006 6 992 Receptor kinase-like Gene Family AT5G20480 40.077 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci206g0006 PK_Tyr_Ser-Thr 1.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci206g0006 - - gmx:100802571 1160.21