Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2053g0004 ATGGAAACTTATTTACACGAAAACTTTGAAGTCAAGTCCAAGAACTCATCTGAAGAGGTTCTTCAGAATTGGAGAAAGCTTTGTGGGTTTGTCAAGAACCCCAAGAGGCGCTTTCGCTTCACAGCCAATCTCTCTAAGCGAGGCGAAGCCGCTGCTATGCGTCGCACCAATCAGGAGAAATTGAGGGTCGCTGTTTTGGTTTCCAAAGCTGCATTTCAGTTTATCCAAGCAGGTGTGCAAGCAAGTGATTACACGGTACCTGAAGAAGTTAAAGAAGCAGGTTTCCAGATCTGTGCTGATGAATTGGAGTCTATTGTTGAAAGACACGACCTAAAGAAGCTAAAATATCATGGTGGGGTTGATGGTATTTCAGAAAAGCTTTCTACCTCAACCGCTGATGGTATTGGCAATGACCCTGACCAACTTGTCAAGAGACAAGAAATTTACGGAATCAACAAATTCACCGAGAGCGAAGCCCGTAGTTTCTGGGTTTTTGTTTTTGAAGCTCTTCAAGACATGACGCTAATGATCCTAGGCGTGTGCGCTCTCGTGTCTCTCGCAATTGGAATAGCGACAGAAGGATGGCCCAGAGGAGCTCACGACGGCCTAGGAATCGTCGTGAGTATCCTTCTGGTCGTGTTTGTGACAGCGACAAGTGATTATCGCCAATCACTACAGTTCAGGGATTTGGACAAGGAGAAAAAAAAGATTTCCATGCAGGTCACAAGAAATGGGTACAGGAAAAAAATGTCAATATATGATTTAGTTCCCGGCGACATTGTGCATCTCGCTATAGGAGATCAAGTCCCTACAGATGGACTCTTCGTTTCAGGATTCTCCGTGCTGATCGACGAGTCGAGTTTAACCGGAGAGAGCGAACCAGTGATGGTGAATTCTCAGAACCCATTTCTTCTTTCTGGAACTAAGGTTCAAGATGGGTCCTGTAAGATGCTGGTCACAACCGTAGGGATGAGAACTCAATGGGGTAAATTAATGGCTACACTGAGTGAAGGTGGAGATGATGAAACACCATTGCAGGTGAAACTGAATGGAGTGGCCACTATCATAGGGAAGATAGGCTTATTCTTCGCTGCTATTACTTTTGTTGTTTTGATGAAGGGACTTATGGCACGCAAACGACAAGAAGGAAGATTTTGGGGTATATCTGGGGATGACGCCATGAAGATGTTGGAATTCTTCGCTGTTGCAGTTACAATCGTTGTCGTTGCTGTCCCTGAAGGGTTGCCATTAGCTGTCACACTGAGCCTTGCGTTTGCTATGAAGAAAATGATGAATGACAAAGCCCTCGTTCGACATTTGGCTGCTTGCGAGACCATGGGATCAGCGACAAGTATATGCAGTGACAAGACAGGCACGCTGACGACCAACCGCATGACTGTCGTCAAAACCTGCATTTGCATGAACATCAAGGAAGTGACCAATGAGGACAAGGTTCTCTCTGAGTTGCCAGATTTTGCCATGAAATTGCTGCTAGAGACCATATTTAATAATACTGGAGGAGAAGTTGTGGCTAAAAGGAAAAGCAAAAGAAAACGTGAGATTCTGGGGACGCCTACAGAAGCCGCAATATTGGAGTATGGGTTGTCACTAGGCGGGGATTTTCAAAAAGAGCGAAAAGCATGCAAGCTTGTGAAAGTTGAGCCATTCAATTCAGAAAAGAAAAGGATGGGTGTAGTTGTGGAGCTGCCTGAAGCAAAATTTCGAGCTCATTGTAAAGGTGCTTCTGAGATCGTCCTGGCTGCTTGTGACAAAGTGATCGATTCAAACGGAGAAGTTGTACCACTTGATCCAGAGAAGAGTAATTATCTTAAAGAAACAATTCACCTGTTTGCTTGTGAGGCACTCAGAACTCTATGCCTTGCCTATATGGAATTGGAAACTGGGTTCTCTGCTGAAGATCCTATCCCTACTTCTGGATATACTTGTATTGCACTTGTTGGTATCAAAGATCCTGTTCGTCCTGGTGTTAGGGAATCTGTAGCAATCTGTCGCTCAGCAGGTATAACAGTAAGAATGGTCACAGGTGACAATATTAACACTGCAAAGGCTATAGCCAGAGAATGTGGGATTTTAACAGACGATGGCATAGCCATTGAAGGCCCAGCTTTTAGAGAGAAGACTCAGGAGGAAATGTTTGAGCTGATTCCTAAGATTCAGGTTATGGCCAGATCCTCACCATTAGATAAGCACACTTTGGTGAAACAATTGCGTACTACGTTTGGAGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGACGCCCCTGCCCTTCATGAAGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTCTCGATGATAATTTCTCTACCATAGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTTGTACAGTTTCAGCTGACAGTTAATGTGGTTGCTTTACTTGTGAACTTCAGTTCAGCTTGCACAACAGGAAGTGCACCTCTTACAGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACGCTTGGAGCACTTGCACTAGCAACTGAGCCTCCAAACGATGAACTAATGAAGCGTTCGCCAGTGGGAAGGAAGGGAAGTTTCATCAGCAATGTCATGTGGAGGAATATCTTAGGTCAATCTCTGTATCAAGTGCTGGTGATATGGATCCTTCAGGCCAGAGGGAAATGGCTATTTGGTATGAAGGGTCCAGATTCTGATGTCTTGCTAAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAACGAGATAAGCTCACGTGAGATGGAGGAAATAGATGTATTTAAAGGCATATTGGATAATCATGTTTTCTTGGGTGTCATAAGTGTCACTGTTTTGTTTCAAATCATAATAGTTGAGTATTTAGGAACCTACGCTAACACAACGCCCCTTGCTCCAATATACTGGTTGTTCAGCGTTTCTATTGGATACTTAGGAATGCCCATTGCTGCTCACTTAAAGAAGATCCCTGTCTGA 3048 0.4377 METYLHENFEVKSKNSSEEVLQNWRKLCGFVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRVAVLVSKAAFQFIQAGVQASDYTVPEEVKEAGFQICADELESIVERHDLKKLKYHGGVDGISEKLSTSTADGIGNDPDQLVKRQEIYGINKFTESEARSFWVFVFEALQDMTLMILGVCALVSLAIGIATEGWPRGAHDGLGIVVSILLVVFVTATSDYRQSLQFRDLDKEKKKISMQVTRNGYRKKMSIYDLVPGDIVHLAIGDQVPTDGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAAITFVVLMKGLMARKRQEGRFWGISGDDAMKMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNIKEVTNEDKVLSELPDFAMKLLLETIFNNTGGEVVAKRKSKRKREILGTPTEAAILEYGLSLGGDFQKERKACKLVKVEPFNSEKKRMGVVVELPEAKFRAHCKGASEIVLAACDKVIDSNGEVVPLDPEKSNYLKETIHLFACEALRTLCLAYMELETGFSAEDPIPTSGYTCIALVGIKDPVRPGVRESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPAFREKTQEEMFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKGSFISNVMWRNILGQSLYQVLVIWILQARGKWLFGMKGPDSDVLLNTLIFNSFVFCQVFNEISSREMEEIDVFKGILDNHVFLGVISVTVLFQIIIVEYLGTYANTTPLAPIYWLFSVSIGYLGMPIAAHLKKIPV 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2053g0004 1015 Gene3D - 168 1001 - -
Prci2053g0004 1015 Pfam Cation transport ATPase (P-type) 511 592 - -
Prci2053g0004 1015 PANTHER CATION TRANSPORTING ATPASE 73 1014 - -
Prci2053g0004 1015 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Prci2053g0004 1015 FunFam Calcium-transporting ATPase 216 336 - -
Prci2053g0004 1015 NCBIfam HAD-IC family P-type ATPase 205 375 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0004 1015 NCBIfam HAD-IC family P-type ATPase 394 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0004 1015 NCBIfam HAD-IC family P-type ATPase 724 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0004 1015 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Prci2053g0004 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1014 IPR023298 -
Prci2053g0004 1015 FunFam Calcium-transporting ATPase 463 658 - -
Prci2053g0004 1015 PRINTS Sodium/potassium-transporting ATPase signature 446 467 - -
Prci2053g0004 1015 PRINTS Sodium/potassium-transporting ATPase signature 203 223 - -
Prci2053g0004 1015 PRINTS Sodium/potassium-transporting ATPase signature 576 594 - -
Prci2053g0004 1015 FunFam Calcium-transporting ATPase 16 76 - -
Prci2053g0004 1015 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Prci2053g0004 1015 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Prci2053g0004 1015 Pfam Cation transporting ATPase, C-terminus 839 1012 IPR006068 -
Prci2053g0004 1015 Gene3D - 16 76 - -
Prci2053g0004 1015 SUPERFAMILY HAD-like 452 859 IPR036412 -
Prci2053g0004 1015 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Prci2053g0004 1015 FunFam Calcium-transporting ATPase 771 1015 - -
Prci2053g0004 1015 SFLD Haloacid Dehalogenase 435 806 - -
Prci2053g0004 1015 Gene3D - 450 799 IPR023214 -
Prci2053g0004 1015 CDD P-type_ATPase_Ca_PMCA-like 144 887 - -
Prci2053g0004 1015 Gene3D - 138 336 - -
Prci2053g0004 1015 Pfam E1-E2 ATPase 236 431 - -
Prci2053g0004 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Prci2053g0004 1015 Gene3D - 463 658 IPR023299 GO:0000166
Prci2053g0004 1015 FunFam Calcium-transporting ATPase 647 799 - -
Prci2053g0004 1015 SFLD p-type atpase 435 806 IPR044492 -
Prci2053g0004 1015 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Prci2053g0004 1015 NCBIfam calcium-translocating P-type ATPase, PMCA-type 108 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2053g0004 1 1015 Primary Pumps ATPases AT4G37640 80.236 0.0 1677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2053g0004 K01537 - gmx:100776926 1673.68