Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2053g0003 ATGGAAACTTATTTACACGAAAACTTTGAAGTCAAGTCCAAGAACTCATCTGAAGAGGTTCTTCAGAATTGGAGAAAGCTTTGTGGGTTTGTCAAGAACCCCAAGAGGCGCTTTCGCTTCACAGCCAATCTCTCTAAGCGAGGCGAAGCCGCTGCTATGCGTCGCACCAATCAGGAGAAATTGAGGGTCGCTGTTTTGGTTTCCAAAGCTGCATTTCAGTTTATCCAAGGTGTGCAAGCAAGTGATTACACGGTACCTGAAGAAGTTAAAGAAGCAGGTTTCCAGATCTGTGCTGATGAATTGGAGTCTATTGTTGAAAGACACGACCTAAAGAAGCTAAAATATCATGGTGGGGTTGATGGTATTTCAGAAAAGCTTTCTACCTCAACCGCTGATGGTATTGGCAATGACCCTGACCAACTTGTCAAGAGACAAGAAATTTACGGAATCAACAAATTCACCGAGAGCGAAGCCCGTAGTTTCTGGGTTTTTGTTTTTGAAGCTCTTCAAGACATGACGCTAATGATCCTAGGCGTGTGCGCTCTCGTGTCTCTCGCAATTGGAATAGCGACAGAAGGATGGCCCAGAGGAGCTCACGACGGCCTAGGAATCGTCGTGAGTATCCTTCTGGTCGTGTTTGTGACAGCGACAAGTGATTATCGCCAATCACTACAGTTCAGGGATTTGGACAAGGAGAAAAAAAAGATTTCCATGCAGGTCACAAGAAATGGGTACAGGAAAAAAATGTCAATATATGATTTAGTTCCCGGCGACATTGTGCATCTCGCTATAGGAGATCAAGTCCCTACAGATGGACTCTTCGTTTCAGGATTCTCCGTGCTGATCGACGAGTCGAGTTTAACCGGAGAGAGCGAACCAGTGATGGTGAATTCTCAGAACCCATTTCTTCTTTCTGGAACTAAGGTTCAAGATGGGTCCTGTAAGATGCTGGTCACAACCGTAGGGATGAGAACTCAATGGGGTAAATTAATGGCTACACTGAGTGAAGGTGGAGATGATGAAACACCATTGCAGGTGAAACTGAATGGAGTGGCCACTATCATAGGGAAGATAGGCTTATTCTTCGCTGCTATTACTTTTGTTGTTTTGATGAAGGGACTTATGGCACGCAAACGACAAGAAGGAAGATTTTGGGGTATATCTGGGGATGACGCCATGAAGATGTTGGAATTCTTCGCTGTTGCAGTTACAATCGTTGTCGTTGCTGTCCCTGAAGGGTTGCCATTAGCTGTCACACTGAGCCTTGCGTTTGCTATGAAGAAAATGATGAATGACAAAGCCCTCGTTCGACATTTGGCTGCTTGCGAGACCATGGGATCAGCGACAAGTATATGCAGTGACAAGACAGGCACGCTGACGACCAACCGCATGACTGTCGTCAAAACCTGCATTTGCATGAACATCAAGGAAGTGACCAATGAGGACAAGGTTCTCTCTGAGTTGCCAGATTTTGCCATGAAATTGCTGCTAGAGACCATATTTAATAATACTGGAGGAGAAGTTGTGGCTAAAAGGAAAAGCAAAAGAAAACGTGAGATTCTGGGGACGCCTACAGAAGCCGCAATATTGGAGTATGGGTTGTCACTAGGCGGGGATTTTCAAAAAGAGCGAAAAGCATGCAAGCTTGTGAAAGTTGAGCCATTCAATTCAGAAAAGAAAAGGATGGGTGTAGTTGTGGAGCTGCCTGAAGCAAAATTTCGAGCTCATTGTAAAGGTGCTTCTGAGATCGTCCTGGCTGCTTGTGACAAAGTGATCGATTCAAACGGAGAAGTTGTACCACTTGATCCAGAGAAGAGTAATTATCTTAAAGAAACAATTCACCTGTTTGCTTGTGAGGCACTCAGAACTCTATGCCTTGCCTATATGGAATTGGAAACTGGGTTCTCTGCTGAAGATCCTATCCCTACTTCTGGATATACTTGTATTGCACTTGTTGGTATCAAAGATCCTGTTCGTCCTGGTGTTAGGGAATCTGTAGCAATCTGTCGCTCAGCAGGTATAACAGTAAGAATGGTCACAGGTGACAATATTAACACTGCAAAGGCTATAGCCAGAGAATGTGGGATTTTAACAGACGATGGCATAGCCATTGAAGGCCCAGCTTTTAGAGAGAAGACTCAGGAGGAAATGTTTGAGCTGATTCCTAAGATTCAGGTTATGGCCAGATCCTCACCATTAGATAAGCACACTTTGGTGAAACAATTGCGTACTACGTTTGGAGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGACGCCCCTGCCCTTCATGAAGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTCTCGATGATAATTTCTCTACCATAGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTTGTACAGTTTCAGCTGACAGTTAATGTGGTTGCTTTACTTGTGAACTTCAGTTCAGCTTGCACAACAGGAAGTGCACCTCTTACAGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACGCTTGGAGCACTTGCACTAGCAACTGAGCCTCCAAACGATGAACTAATGAAGCGTTCGCCAGTGGGAAGGAAGGGAAGTTTCATCAGCAATGTCATGTGGAGGAATATCTTAGGTCAATCTCTGTATCAAGTGCTGGTGATATGGATCCTTCAGGCCAGAGGGAAATGGCTATTTGGTATGAAGGGTCCAGATTCTGATGTCTTGCTAAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAACGAGATAAGCTCACGTGAGATGGAGGAAATAGATGTATTTAAAGGCATATTGGATAATCATGTTTTCTTGGGTGTCATAAGTGTCACTGTTTTGTTTCAAATCATAATAGTTGAGTATTTAGGAACCTACGCTAACACAACGCCCCTTGCTCCAATATACTGGTTGTTCAGCGTTTCTATTGGATACTTAGGAATGCCCATTGCTGCTCACTTAAAGAAGATCCCTGTCTGA 3045 0.4374 METYLHENFEVKSKNSSEEVLQNWRKLCGFVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQASDYTVPEEVKEAGFQICADELESIVERHDLKKLKYHGGVDGISEKLSTSTADGIGNDPDQLVKRQEIYGINKFTESEARSFWVFVFEALQDMTLMILGVCALVSLAIGIATEGWPRGAHDGLGIVVSILLVVFVTATSDYRQSLQFRDLDKEKKKISMQVTRNGYRKKMSIYDLVPGDIVHLAIGDQVPTDGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAAITFVVLMKGLMARKRQEGRFWGISGDDAMKMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNIKEVTNEDKVLSELPDFAMKLLLETIFNNTGGEVVAKRKSKRKREILGTPTEAAILEYGLSLGGDFQKERKACKLVKVEPFNSEKKRMGVVVELPEAKFRAHCKGASEIVLAACDKVIDSNGEVVPLDPEKSNYLKETIHLFACEALRTLCLAYMELETGFSAEDPIPTSGYTCIALVGIKDPVRPGVRESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPAFREKTQEEMFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKGSFISNVMWRNILGQSLYQVLVIWILQARGKWLFGMKGPDSDVLLNTLIFNSFVFCQVFNEISSREMEEIDVFKGILDNHVFLGVISVTVLFQIIIVEYLGTYANTTPLAPIYWLFSVSIGYLGMPIAAHLKKIPV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2053g0003 1014 Gene3D - 167 1000 - -
Prci2053g0003 1014 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 662 IPR023299 GO:0000166
Prci2053g0003 1014 FunFam Calcium-transporting ATPase 770 1014 - -
Prci2053g0003 1014 NCBIfam HAD-IC family P-type ATPase 723 833 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0003 1014 NCBIfam HAD-IC family P-type ATPase 393 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0003 1014 NCBIfam HAD-IC family P-type ATPase 204 374 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2053g0003 1014 Pfam E1-E2 ATPase 235 430 - -
Prci2053g0003 1014 Gene3D - 449 798 IPR023214 -
Prci2053g0003 1014 PANTHER CATION TRANSPORTING ATPASE 70 1013 - -
Prci2053g0003 1014 SFLD p-type atpase 434 805 IPR044492 -
Prci2053g0003 1014 Gene3D - 137 335 - -
Prci2053g0003 1014 FunFam Calcium-transporting ATPase 16 76 - -
Prci2053g0003 1014 FunFam Calcium-transporting ATPase 462 657 - -
Prci2053g0003 1014 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
Prci2053g0003 1014 Gene3D - 462 657 IPR023299 GO:0000166
Prci2053g0003 1014 PRINTS Sodium/potassium-transporting ATPase signature 575 593 - -
Prci2053g0003 1014 PRINTS Sodium/potassium-transporting ATPase signature 445 466 - -
Prci2053g0003 1014 PRINTS Sodium/potassium-transporting ATPase signature 202 222 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Prci2053g0003 1014 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Prci2053g0003 1014 SFLD C1.7: P-type atpase like 434 805 - -
Prci2053g0003 1014 Gene3D - 16 76 - -
Prci2053g0003 1014 Pfam Cation transporter/ATPase, N-terminus 115 184 IPR004014 -
Prci2053g0003 1014 SUPERFAMILY HAD-like 451 858 IPR036412 -
Prci2053g0003 1014 FunFam Calcium-transporting ATPase 646 798 - -
Prci2053g0003 1014 SUPERFAMILY Calcium ATPase, transduction domain A 238 332 IPR008250 -
Prci2053g0003 1014 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Prci2053g0003 1014 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Prci2053g0003 1014 SMART Cation_ATPase_N_a_2 113 189 IPR004014 -
Prci2053g0003 1014 Pfam Cation transport ATPase (P-type) 510 591 - -
Prci2053g0003 1014 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1013 IPR023298 -
Prci2053g0003 1014 CDD P-type_ATPase_Ca_PMCA-like 143 886 - -
Prci2053g0003 1014 NCBIfam calcium-translocating P-type ATPase, PMCA-type 107 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci2053g0003 1014 FunFam Calcium-transporting ATPase 215 335 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2053g0003 1 1014 Primary Pumps ATPases AT4G37640 80.315 0.0 1681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2053g0003 K01537 - gmx:100776926 1678.3