Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci204g0002 ATGGAGGTTAAGCGTCGAACGGTTCGCTCCCTTGTGGGGAAGCTGAGCTCTGTTTCTGAGCAGACCCAGCTCGATGCTCTCCGCCAGCTGCGCTTGATGACCAAGCAGGACGAAGAGGCCCGACCCGTGATCGTTGATTCGGGTGCGATTCCCTACTTGGCTGATACTCTCTTGTCGTCTTCACACGATTTCCAAGAGAACGCCTCGGCGACGCTTCTCAACATCTCGATTTCCTGTAGAGAGTCCCTCATGTCCACACGCGGAGTGCTCGATGCCATCTCGCACTTGCTTACCCGCCATAACTCGACTTCGTCTGCTCCCGCTGTCCAATCCTGCGCCGCCACGTTGTACAGCCTCCTCGTCGTCGATAACTATAGGCCTATCATTGGTTCCAAGCGTGACATTGTGTACGCGCTCGTGGATATTATCAAAACCCCCAATTCGCCGATCAGATCGATCAAGGACGCTCTCAAGGCTCTGTTTGGAATCGCTCTTCATCCGCTTAATCGGTGCACGATGATACAACTTGGTGCGGTTGAAGCTCTTTTCTCGTTGGTTCAGAAGGACCGGAAGGTCGGGATTGTGGAGGATGCGACGGCGGTGATAGCGCAAATCGCGGGCTGTGAAGAGAGCGAGGAAGCGTTTCAGAAGGTGTCGGGAATCGGTGTGCTGGTTGATCTTCTGGATATGGCGAATAAGTCGAGCATGAAGACGAAGGAGAATGCTGTCTCTGGGTTACTGAAGCTAGTGAGATGTGGAGGGGAGAAAGTAGCCATGGATGTGAGAATGAGAGCTTTAGGGGCATTCGATGGAATTGCGGACGTGCAACTGAACGGAAGCACCAAAGGGAAGAGCAAGGCGGCGGCGTTATCGGTGGAATTGATCGGAGATGGAAACCATTGGAATACACAGAGGGATTCCCGGTTTGATTCCTCAACAAGTCAAGACTCATCATTTTCATTCAATTTCTCGACAGATTCATCAGAATTTGTTCTGATTTAA 1002 0.519 MEVKRRTVRSLVGKLSSVSEQTQLDALRQLRLMTKQDEEARPVIVDSGAIPYLADTLLSSSHDFQENASATLLNISISCRESLMSTRGVLDAISHLLTRHNSTSSAPAVQSCAATLYSLLVVDNYRPIIGSKRDIVYALVDIIKTPNSPIRSIKDALKALFGIALHPLNRCTMIQLGAVEALFSLVQKDRKVGIVEDATAVIAQIAGCEESEEAFQKVSGIGVLVDLLDMANKSSMKTKENAVSGLLKLVRCGGEKVAMDVRMRALGAFDGIADVQLNGSTKGKSKAAALSVELIGDGNHWNTQRDSRFDSSTSQDSSFSFNFSTDSSEFVLI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci204g0002 333 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Prci204g0002 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 220 IPR000225 GO:0005515
Prci204g0002 333 PANTHER U BOX DOMAIN-CONTAINING 7 295 - -
Prci204g0002 333 FunFam ARM repeat superfamily protein 2 300 - -
Prci204g0002 333 Gene3D - 2 291 IPR011989 -
Prci204g0002 333 SMART arm_5 166 207 IPR000225 GO:0005515
Prci204g0002 333 SMART arm_5 37 77 IPR000225 GO:0005515
Prci204g0002 333 SMART arm_5 208 251 IPR000225 GO:0005515
Prci204g0002 333 SUPERFAMILY ARM repeat 6 273 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci204g0002 8 290 U-box Gene Family AT2G23140 33.803 1.48e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci204g0002 - - pcin:129316132 582.022