Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2046g0001 TCCAACGGCGTCCTCAAGCGCCACCACCACCACCGCCTGGCCAGCCAGCCCCTGCCCGTCACGTACAAGGAGTGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCCTCGACGGTTGTGGCGAGTTCATGGCCTCTCCCACCGCCAGCCTCGCCGACCCCAGCTCCATCAAATGTGCCGCATGCGGCTGCCACCGCAATTTCCACCGCCGTGAGCCCGAAGAGCCTATGTCCACGACTCACGTCATCGAGTTCCAGTCCCACCATCGGCACCATCCCCCGCCGCCCCCGCCCTTTCAGGTTTCCAATCGCAGCCCCAATTCGGCGTCGCCGCCTCCGATCTCCTCTTCTTACTACCCGTCCGCGCCTCATATGCTTCTGGCTCTCTCTGCGGCCGGGATACAAGCGCCGCCGGAGAGCGCGGCCGCTCCCGCTAACGCTCTGGCAACGCCGAGCCCGAATGCGAGGAAGCGGTTCAGGACCAAGTTCACCCAGGATCAGAAGGAAAAGATGTACCATTTCGCGGAGAAGTTGGGGTGGAAGATGCAGAAGAGGGACGAAGAATTGGTTCAAGAGTTCTGCAATGAGGTTGGGGTGGACATGTGGGTGTTGAAGGTTTGGATGCACAACAACAAGAACACTTTCGGCAGGAGAGATTCTGCTAATCATGACGGTAGGAACGCTCTAGAGCAAGACCCTCGTGCCCTCACCACTGAAATCCACGCCAACAACGACAACGGCAGCGCGCAGGATGCGAGTCATCACCTCTACACCAACGATAATAGTGGGGCAAACCTTGGTACTAATGGGTCCTCTTCGTCCTCTTGA 831 0.5933 MDLSSAPVTNIAASNSTAAKSPEPDTEIPTRIQPAPSKSFFSNGVLKRHHHHRLASQPLPVTYKECLKNHAASLGGHALDGCGEFMASPTASLADPSSIKCAACGCHRNFHRREPEEPMSTTHVIEFQSHHRHHPPPPPPFQVSNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAAPANALATPSPNARKRFRTKFTQDQKEKMYHFAEKLGWKMQKRDEELVQEFCNEVGVDMWVLKVWMHNNKNTFGRRDSANHDGRNALEQDPRALTTEIHANNDNGSAQDASHHLYTNDNSGANLGTNGSSSSS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2046g0001 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 256 - -
Prci2046g0001 317 MobiDBLite consensus disorder prediction 1 42 - -
Prci2046g0001 317 MobiDBLite consensus disorder prediction 126 156 - -
Prci2046g0001 317 SUPERFAMILY Homeodomain-like 192 259 IPR009057 -
Prci2046g0001 317 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Prci2046g0001 317 MobiDBLite consensus disorder prediction 285 317 - -
Prci2046g0001 317 FunFam Zinc-finger homeodomain protein 2 186 259 - -
Prci2046g0001 317 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Prci2046g0001 317 MobiDBLite consensus disorder prediction 1 23 - -
Prci2046g0001 317 NCBIfam homeobox domain, ZF-HD class 198 255 IPR006455 -
Prci2046g0001 317 Gene3D - 187 258 - -
Prci2046g0001 317 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 62 114 IPR006456 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2046g0001 1 254 ZF-HD Transcription Factor Family AT5G15210 52.124 2.04e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci2046g0001 ZF-HD_dimer 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2046g0001 - - qsa:O6P43_009085 367.081