Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci203g0001 ATGGCAGACTCAAAGTGTAATTCGAAAATGTTCAGTATACGGATTGTGTCTATCGACTACTACATGGCACAGCCGATTCCAGGCCTGGATATCTGTTACAGTAGTTTCCATGGTGGGAAAGTGAATGAGGTTCCCGTTATAAGAATATACGGTTCTACTCCAGCTGGGCAGAAAACTTGTTTGCATATACATCGGGCTTTGCCGTACATGTATGTGCCATGCGCTGATATACCTCTTCAGTCAGATCAAGAAGGAGATGCGTACACATATAAGGTATCTGCATCTCTTGAGAAAGCCTTGAAGCTAAAAGGCAGCAGCGGTTTGACAAGACAACATGTACATGGCTGCAGCCTTGTAAGAGCAAGGAGATTTTATGGTTATCATTCATCAGAGGAATTATTTGTGAAGATATACCTATATTATCCACAAGATGTCTCCCGTGCTGCTAATCTACTATTGGTCGGTGCTGTTCTTGGCAAAAGCTTACAGCCCTATGAATCACATATTCCCTTCATTCTTCAGTTTCTGGTTGACTATAACTTGTATGGCATGGGTCTCCTGCACTTGTTAAAGTTGAAGTTCCGCCATCCTATGCCAGATTCTTCTCACAAGAAATTGATTTTCAATAATCAACGGACAGGGGCTGATACGGATGGTGATGCGTGTTTAGGGCCAGCAGCGTGGGCCTTATCAATGGTCTCACCTGATCGGATGTGGCAACTTCCAAGTGAATTGGATGCTTCATCAAATCATGAGGCTCATTGCCCTAAACGTCAAAGCACATGTGAACTGGAGGGCGATGCTTCTGTAGATGATATTCTTAATCAGCAGTTTAAAATGTATTCGTCCCTCTCACAAACCCGATCAGATGTGCAAAAGGTTCAGTCTCTTGTACCAATTTGGAAGGAGCAGCAAGAAAGGACTGGCATTTATGAGGATACTATAACTCGTGATACTGGGAAGCCACTGCCAGAAGTTGTTATGAGAAGTCTTTCTGGTGGTCTTGACTTTGAGAAAAAATTTGTTGAAATGTGCTGTGAAGCTGAAACCTGTGCATCTTTTATTTCATCTGAAGAGTCGAGAGAAACAGACATAATAGGTTCAGCATCGCCACCAGCTTCACTATGCAAAGATGCCAAATTGCATGAAGAAGGGACTGAGGCAAATCTCAGATTGTTGACTGTTGATGAAATGCAATCATCTGAGATTATTGGAACACAGGGCAAAAAGGCTGCAGATAAGGAAGCATTGAATCTCCTAAAGTGGCTTGCAACTTCTCAAGCTGCAGAGGATATTAACTCTGATGATGAACTTATTCGTGAAACCATTTTGAGTCCCTTGTTACCTGCTACAACAATTGATAAGGTGCTGGAGAAAGCTAATATGGATTACGAAAGTGAGTCCCAAAAGGAGTGTCAAGATATTCTTGATTCCATTGACGATCAACTTCAGCTGGAGTCATCAAAGAGAAAGCCACCTTTTTCCTCAAATTTTAATTGTCCTGTTGAGTCTTCATCAAACAATATGATTCCCCAAGTTGATGGTTCTGCCGATGATGAGTTTGCAAGCCCAAGTTCTGGTTCAGAGGGAATTTCATTTGCACTGGACCAAAAAGGTGAATCCAAGAGGTCTTCCAAACACTGTATACTGCAAAATACCAGAACAAATACTTATAGCAAAGATAACAGGAATAAAGTATGGGGCACTTTGCCATTGTCAATGACCCATAACAATTTTGATCATGCTAGTTTACATTGTGGCCATACTTCTGAAAAGGAAACTGTAGAATCTGTTGACTCAGATTGTTTGGCCAGAAATGAGATAGAGAATAATGGCATAAAGAATGGGGATGAAGGTGTTTCAGACATAAAAGGAGTACAAACACTGGATAATTGCTCTGTGCGGGACTTGATGAGGAGAAAGAGATGCTATCGAGTTGAACAAGCTGACAGTGAATCTGAAATAACTAAAAAACTACATTTAGATGGGGATGAGAAACTCAAAACTGATGGAGAAACAGAAGTCCAGAAGAGCTGTGTCCTGAAAATGACCAATCATGATTTAGTGTGTAGGAAAGCACCCCTTGTAGCTGGCAGTCAAACCGGACTGAGTCTCTGTGGACCGAAGAAGTTTCACTCTACTAGTTCTTCTGATTACTCAGAGGTTTCCAGTGGTAAAAAGTTTAAGGTTGACTCAACACATGTACAAACTGACAACTGTCCACAAATTGACATGGCAGCCTTAGGTAGTGTGCAAAGCTCTTCGATTGAGAATATACAGTCTGTCAGAGATAATTGCATGTATAAATGTCCTTATGGAAGCAAATCTTATGAGCAACACGGTCAGATGAGGTCATGTGATATTGTTGTGGGTGCGAATACTGCAACTGACATTCAAGTATTGCAATGTGTAAGAAGTGATGGCAAAAGACCTAGAGAGAATTTGGGTTTTTATGAGACTAGTGGCATAGAACCTTCGATCAATGACATTATGGGTGATCACATGAGATTAACCTCTACAAGGGCATCTGCCATGGCAGTGAAACCTCTGGATGATGTTATTCCTGCTTCTGCTGGTAGTTACCAGAATGAGATGGAAACTTGGAACAAGCATGTCGCCGATAATGCCCCGGATTCTAAGGGGAAAAGGGTCTTGGGTGTTGCCAAATACTATCAGAATGATGGCTCTCATCTATGCCTATTGAAACCCAAATTTTTGCCTCCTTCTGAGGGTAATGTTCGGAGATGGCTACTTTGTGACGAGAGAGATCAAATGTTTCAACAATCTGATGCAAAGGAGAAGCATATGCCTAAATGGAATACAAGACCTTGTCTTATGTCTAAACATGTCCAAGATGTTGATTCTGAAAAGAAGTCTCCATGCATCAGCAGTGGAGAAATGAATATAATCAAAACAAGCTTGGACGGCTCGCAAGATACTTCTCAGATATCAGGCCCTGATGGGAAATCAACGCCTACTCCTCTTAGTCAAATTGGATTTTGTGACCCTGCAAGAATTGGCTGTGGACAGCAATTGACGGTACTCAGTATTGAGGTTCTTGCAGAATCAAGAGGAGAACTTTTACCTGATCCCCAGTTTGATGCCATCAACATTGTAGCTCTTGGTTTTCAAAATGATAGTGACACTGTTGTTGATGTTCTCGTCCTTTTGCATTGTAAACTAGAACCTTGTCAAAGAAATTTTGTGAGTCTATCAGGCTGCAAGGTGTTGGTTTTCACAGATGAAAAGCACTTGCTAAAAAAATTTATTAATATTGTATCTTCGTATGATCCAGATATTCTGATGGGTTGGGATATCCAAGGCGGTTCTCTTGGTTTTTTAGCAGAAAGGGCTTTGCATCTTGGATTAGGGTTACTTAATAGTTTATCTCGTACTCCATCTGACTCTTGGATTACTTCTGGTGATACTGAAACTTCTGAAAAAGACATATCAGCAACTGCCGTTCCTGATATATCTAGTGCAGATGATGTACAAGAAAGTTCGATAATTGAGGATGAATGGGGACGAACACATTCCAGTGGAGTTCATGTTGGTGGCAGAATTGTGCTTAATGTGTGGCGACTTATCCGTGGAGAAGTTAAGCTCAATTTATACTCAGTTGAAGCTGTAGCTGAAGCTGTATTGAGGAGGAAAGTTCCTTCAATTCACAACAAGGTCCTAACCAAATGGTTTTCTGGTGGTCCTGGAGGAGCAAGGTATCAGTGTGTCAAATATATTACTGAGAGAGCAAAGCTGAATCTTGAGATATTAAGCCAACTTGATATGGTTAATCGAACATCAGAACTTGCTCGTATTTTTGGTATAGATTTTTTTTCTGTTCTCTCCAGAGGTTCACAATACCGTGTCGAATCGATGTTTCTGAGGTTGGCACATACACAAAACTATCTCGCCATCTCTCCTGGGAATCAACAGGTTGCTTCTCAACCTGCCATGGAGTGCCTGCCTCTTGTGATGGAACCAGAGTCAGGATTTTATTCAGATCCGGTTATTGTATTTGACTTTCAGTCATTATATCCATCCATGATAATTGCATACAACCTTTGCTTTTGTACGTGCCTTGGCAAAGTTGTGGCATCAAAAGAAAACACGCTTGGGGTTAGTTCATTTTCACCAGAGCAACATGTTCTGCGGGATCTAAAAGATCAGATTTTGCTTACTCCAAACGGTGTTATGTTTGTTCCTTCGAAGGTTCGTCGAGGTATACTGCCACACTTGTTGGAAGAAATTTTATCAACTAGGGTAATGGTGAAACAAGCAATGAAAAAGTTGGCTCCTTCACAGCAAGTCCTTCAGCGGATATTTAATGCAAGACAGCTTGCTTTGAAGCTTATATCAAATGTGACATATGGCTACACTGCTGCTGGATTTAGTGGTCGTATGCCTTGTGCAGAGCTTGCAGACAGTATTGTTCAATGCGGCCGTTGCACGCTGGAAAGGGCTATATCATTTGTAAATCAGCATGATAAGTGGAACGCAAAAGTCATTTATGGAGATACTGATAGCATGTTTGTTCTTCTCAAAGGACGCACTATTAAAGAATGTTTCCAAATAGGGAGTGAGATTGCTTCTGCTGTCACCGCTATGAATCCTAGTCCTGTCACCCTGAAGTTGGAGAAAGTTTATCAGCCTTGTTTCCTCCTTACTAAGAAGCGGTATGTTGGTTACAGTTATGAAAGCCCTGATCAAGGTGAGCCAGTTTTTGATGCTAAAGGTATTGAGACAGTTCGTAGAGACACGTGTGGTGCAGTTGCAAAGATAATGGAACAGTCTTTGAGGCTCTTTTTTGAAAATAAGGATTTATCGGAGGTGAGAAGTTATTTGCAACGTCAGTGGAAGAAAATTCTTTCGAGCAAAGTCTCCATTAAAGATTTTGTCTTTGCTAAGGAGGTTCGTTTAGGTAGCTATAGTGCAAGGACATCATCTTTACCTCCAGCTGCAATTGTTGCCACCAAGGCAATGAGATTTGACCCTAGGGCAGAACCGCGTTATGCTGAGAGAGTACCTTATGTTGTAATCCACGGAGAGCCTGGAGCCCGCCTGGTTGACGTGGTTGTGGATCCATTGGAAGTTTTGGCACTTAATTCCCCACTCAGAATAAATGACTTGTATTACATCAATAAACAAGTAATACCTGCTTTGCAGCGGGTGTTTGGGCTTGTTGGTGCTGACCTGAACCAATGGTTCTTAGAGATGCCCCGTCCTTTAAAGGATGCACGTGTAAAGCATCTCATTGCTCCAAATTCACATCGAACGAGAATTGACTCGTATTATCTGTCAAAACATTGTATACTGTGTGGCGGGTTGGTTCAGGCGTCTGCACACATATGCATTCAGTGCTCTGAAAATGGAGTGGCCGCTGCAACGGCTGTGATTAGTAAAACATCAAAGTTGGAGCAAGAGATGCAGCATCTTGTTGCTATATGTGACCACTGTGGAGGTGGAGGCAGGTTTCTGGAAAGTGATGTAAAGTGCACATCAATTTCATGCTCGGTGTTTTATGAGAGACGAAAAGTTCAGAAAGAACTACTAGCGATGAACCATGTTGCTGCTGGTGCAGGCTTCTATCCGAAGTGCATGGTCGAGTGGTTCTGA 5613 0.418 MADSKCNSKMFSIRIVSIDYYMAQPIPGLDICYSSFHGGKVNEVPVIRIYGSTPAGQKTCLHIHRALPYMYVPCADIPLQSDQEGDAYTYKVSASLEKALKLKGSSGLTRQHVHGCSLVRARRFYGYHSSEELFVKIYLYYPQDVSRAANLLLVGAVLGKSLQPYESHIPFILQFLVDYNLYGMGLLHLLKLKFRHPMPDSSHKKLIFNNQRTGADTDGDACLGPAAWALSMVSPDRMWQLPSELDASSNHEAHCPKRQSTCELEGDASVDDILNQQFKMYSSLSQTRSDVQKVQSLVPIWKEQQERTGIYEDTITRDTGKPLPEVVMRSLSGGLDFEKKFVEMCCEAETCASFISSEESRETDIIGSASPPASLCKDAKLHEEGTEANLRLLTVDEMQSSEIIGTQGKKAADKEALNLLKWLATSQAAEDINSDDELIRETILSPLLPATTIDKVLEKANMDYESESQKECQDILDSIDDQLQLESSKRKPPFSSNFNCPVESSSNNMIPQVDGSADDEFASPSSGSEGISFALDQKGESKRSSKHCILQNTRTNTYSKDNRNKVWGTLPLSMTHNNFDHASLHCGHTSEKETVESVDSDCLARNEIENNGIKNGDEGVSDIKGVQTLDNCSVRDLMRRKRCYRVEQADSESEITKKLHLDGDEKLKTDGETEVQKSCVLKMTNHDLVCRKAPLVAGSQTGLSLCGPKKFHSTSSSDYSEVSSGKKFKVDSTHVQTDNCPQIDMAALGSVQSSSIENIQSVRDNCMYKCPYGSKSYEQHGQMRSCDIVVGANTATDIQVLQCVRSDGKRPRENLGFYETSGIEPSINDIMGDHMRLTSTRASAMAVKPLDDVIPASAGSYQNEMETWNKHVADNAPDSKGKRVLGVAKYYQNDGSHLCLLKPKFLPPSEGNVRRWLLCDERDQMFQQSDAKEKHMPKWNTRPCLMSKHVQDVDSEKKSPCISSGEMNIIKTSLDGSQDTSQISGPDGKSTPTPLSQIGFCDPARIGCGQQLTVLSIEVLAESRGELLPDPQFDAINIVALGFQNDSDTVVDVLVLLHCKLEPCQRNFVSLSGCKVLVFTDEKHLLKKFINIVSSYDPDILMGWDIQGGSLGFLAERALHLGLGLLNSLSRTPSDSWITSGDTETSEKDISATAVPDISSADDVQESSIIEDEWGRTHSSGVHVGGRIVLNVWRLIRGEVKLNLYSVEAVAEAVLRRKVPSIHNKVLTKWFSGGPGGARYQCVKYITERAKLNLEILSQLDMVNRTSELARIFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYSDPVIVFDFQSLYPSMIIAYNLCFCTCLGKVVASKENTLGVSSFSPEQHVLRDLKDQILLTPNGVMFVPSKVRRGILPHLLEEILSTRVMVKQAMKKLAPSQQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLERAISFVNQHDKWNAKVIYGDTDSMFVLLKGRTIKECFQIGSEIASAVTAMNPSPVTLKLEKVYQPCFLLTKKRYVGYSYESPDQGEPVFDAKGIETVRRDTCGAVAKIMEQSLRLFFENKDLSEVRSYLQRQWKKILSSKVSIKDFVFAKEVRLGSYSARTSSLPPAAIVATKAMRFDPRAEPRYAERVPYVVIHGEPGARLVDVVVDPLEVLALNSPLRINDLYYINKQVIPALQRVFGLVGADLNQWFLEMPRPLKDARVKHLIAPNSHRTRIDSYYLSKHCILCGGLVQASAHICIQCSENGVAAATAVISKTSKLEQEMQHLVAICDHCGGGGRFLESDVKCTSISCSVFYERRKVQKELLAMNHVAAGAGFYPKCMVEWF 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci203g0001 1870 FunFam DNA polymerase 1019 1319 - -
Prci203g0001 1870 SUPERFAMILY DNA/RNA polymerases 1323 1735 IPR043502 -
Prci203g0001 1870 SUPERFAMILY Ribonuclease H-like 27 1282 IPR012337 -
Prci203g0001 1870 Pfam C4-type zinc-finger of DNA polymerase delta 1769 1842 IPR025687 -
Prci203g0001 1870 CDD POLBc_zeta 1284 1732 - -
Prci203g0001 1870 Gene3D DNA Polymerase, chain B, domain 1 29 196 - -
Prci203g0001 1870 CDD DNA_polB_zeta_exo 1009 1258 - -
Prci203g0001 1870 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 6 1863 IPR030559 GO:0006281|GO:0016035|GO:0019985
Prci203g0001 1870 SMART polmehr3 1010 1515 IPR006172 GO:0000166|GO:0003676|GO:0003887
Prci203g0001 1870 MobiDBLite consensus disorder prediction 488 532 - -
Prci203g0001 1870 Gene3D - 1578 1741 IPR042087 -
Prci203g0001 1870 MobiDBLite consensus disorder prediction 973 992 - -
Prci203g0001 1870 ProSitePatterns DNA polymerase family B signature. 1503 1511 IPR017964 GO:0000166|GO:0003676
Prci203g0001 1870 PRINTS DNA-directed DNA-polymerase family B signature 1501 1509 IPR006172 GO:0000166|GO:0003676|GO:0003887
Prci203g0001 1870 PRINTS DNA-directed DNA-polymerase family B signature 1336 1349 IPR006172 GO:0000166|GO:0003676|GO:0003887
Prci203g0001 1870 PRINTS DNA-directed DNA-polymerase family B signature 1445 1457 IPR006172 GO:0000166|GO:0003676|GO:0003887
Prci203g0001 1870 Gene3D Palm domain of DNA polymerase 1322 1567 IPR023211 -
Prci203g0001 1870 Pfam DNA polymerase family B, exonuclease domain 55 190 IPR006133 -
Prci203g0001 1870 Pfam DNA polymerase family B, exonuclease domain 1011 1141 IPR006133 -
Prci203g0001 1870 Gene3D - 1037 1319 IPR036397 GO:0003676
Prci203g0001 1870 Gene3D Helix hairpin bin 1402 1462 - -
Prci203g0001 1870 FunFam DNA polymerase 30 196 - -
Prci203g0001 1870 FunFam DNA polymerase 1578 1746 - -
Prci203g0001 1870 MobiDBLite consensus disorder prediction 486 539 - -
Prci203g0001 1870 FunFam DNA polymerase zeta 1403 1462 - -
Prci203g0001 1870 Pfam DNA polymerase family B 1277 1724 IPR006134 GO:0000166|GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci203g0001 39 209 Core DNA Replication Machinery Family AT5G63960 25.568 3.72e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci203g0001 K02350 - gmx:100777934 2455.63