Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2022g0001 ATGTGCAATGACGATGGACCTTGTCGAGACTGTTCACCGAAGCAGTTGCGGATGATCTTCTTACAGGGACCAACAGATGAAGCTCTAAAGAAAAAAATAGATGCCCAGAATTGTCAGAGGTTTTCCTATAAAACCTTATGTCAAGCTACCAATAGATTTGCCTCTCGAAATAAGCTCGGTCAAGGAGGCTATGGACTTGTGTACAAGGGGGAGTTGGATGATGGGAAAGAGATTGCAGTGAAGATGCCATTAAATGTGTCAACACAGCATGAGGAACAATTGATAAAGGAGAGAGAGTTGCTGAGTAGCGTGAAACACCCTAATGTGGTGAAATTGTTTGGTTATTGCACTAATAAGAAAAAAATCTTACTTGTTTACGAGTACATTCCCAACAAGAGTCTCAACGTGCTTTTATTG 417 0.4101 MCNDDGPCRDCSPKQLRMIFLQGPTDEALKKKIDAQNCQRFSYKTLCQATNRFASRNKLGQGGYGLVYKGELDDGKEIAVKMPLNVSTQHEEQLIKERELLSSVKHPNVVKLFGYCTNKKKILLVYEYIPNKSLNVLLL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2022g0001 139 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Prci2022g0001 139 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 137 - -
Prci2022g0001 139 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Prci2022g0001 139 Pfam Protein tyrosine and serine/threonine kinase 56 137 IPR001245 GO:0004672|GO:0006468
Prci2022g0001 139 SUPERFAMILY Protein kinase-like (PK-like) 35 137 IPR011009 -
Prci2022g0001 139 ProSiteProfiles Protein kinase domain profile. 53 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2022g0001 139 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 27 128 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2022g0001 32 139 Receptor kinase-like Gene Family AT4G11530 40.741 9.29e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2022g0001 Pkinase 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2022g0001 - - pcin:129301298 287.345