Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci201g0001 ATGCTTGGCACATACCTGAATGTCCTGGCCTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACTCAACAGGGGAAAATAGTATTCACTTCCTATGGCACCACATTGTATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTACTGCCTGTTTTTTGTTCTCTTTGTGCTGTTGGGGGTCTACTTTGTCACGAATTTGGTCCTTGCCGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTTTGAGATGGATCAAATGAGAAGAAATATGTTGGGGAAAGCATTTGATCTGTTAGATGATAATCATGTTGGGTATCTTAACAAAGACCAATGTATTGAACTCTTTCAGGAGCTGAACAAGTACAGGACTTTGCCAAATATTTCCCGGGAAGAATTTGAGTTGATATTTGATGAGCTGGACGATAGTCATGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAGTTCCAGAAGGAGGATAGTCCATCTTACTTTGATTACTTTTCATTCTACCATGCTTCTATCTCCAAGAAGTTGAAAGCCTTTGTGCGGTGCCCCAAGTTTGGATTGCTAATATCCTTCATTCTTATATTGAATCTGATAGCTGTTGTAATTGAGACAACGCTTGATCTACAAAATAATTCTGCTCAAAAGGTGTGGCAAGGGGTTGAGTTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTTTAAAAGTTTATTCATATGGATTTGAGAATTATTGGCGGGATGGTCAAAATTGCTTTGATTTTATGATCACATGGATAATTGTCATCGGGGAAACTATGACTTTTGTTACACCTGATGGGCTGATCTTTTTCTCAAATGGAGAATGGATTCGGTACCTTCTTTTAGCAAGAATGCTGAGGTTGATAAGGCTCCTTATGCATGTCCAGCAATACCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCAAGTTTGATGCCATACCTTGGAACCATATTTTGTATCTTATGTATTTATTGCTCCCTTGGTGTACAGATCTTCGGTGGAATTGTCAATGCTGGAAATCCCAAATTGGAAACAACAGGCCTTTCTGACAATGACTATCTGATCTTTAATTTTAATGATTATCCAAATGGAATGGTTACACTTTTCAATTTGCTAGTCATGGGAAACTGGCATGTATGGATGCAGAGCTACAAGGAATTAACAGGAACTTCTTGGACCTATCTTTACTTTATTAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACGTCTGCTGATACTAGAGAAGAAGATGACAAGGAGGTTGAAGGAGAAAGACATCGAAGACGACGTATTGGCACCAAATCCCGCAGCCAAAGGGTTGATGTTCTTCTTCATCATATGTTGAGCTCTGAGTTGTGTCAAGCACAGCCTTCACATCCATAA 1569 0.3907 MLGTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVFEMDQMRRNMLGKAFDLLDDNHVGYLNKDQCIELFQELNKYRTLPNISREEFELIFDELDDSHDVKINKDEFADICNAIALKFQKEDSPSYFDYFSFYHASISKKLKAFVRCPKFGLLISFILILNLIAVVIETTLDLQNNSAQKVWQGVEFVFGWIYVIEMALKVYSYGFENYWRDGQNCFDFMITWIIVIGETMTFVTPDGLIFFSNGEWIRYLLLARMLRLIRLLMHVQQYRAFVATFLTLIPSLMPYLGTIFCILCIYCSLGVQIFGGIVNAGNPKLETTGLSDNDYLIFNFNDYPNGMVTLFNLLVMGNWHVWMQSYKELTGTSWTYLYFISFYLITVLLLLNLVVAFVLEAFFAEMELETSADTREEDDKEVEGERHRRRRIGTKSRSQRVDVLLHHMLSSELCQAQPSHP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci201g0001 522 SUPERFAMILY Voltage-gated potassium channels 217 463 - -
Prci201g0001 522 ProSiteProfiles EF-hand calcium-binding domain profile. 152 187 IPR002048 GO:0005509
Prci201g0001 522 MobiDBLite consensus disorder prediction 474 497 - -
Prci201g0001 522 Pfam Ion transport protein 220 464 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci201g0001 522 Pfam Ion transport protein 3 99 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci201g0001 522 Pfam EF-hand domain pair 116 180 IPR002048 GO:0005509
Prci201g0001 522 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 518 IPR044581 GO:0005245
Prci201g0001 522 Gene3D - 343 503 - -
Prci201g0001 522 Gene3D - 1 120 - -
Prci201g0001 522 Gene3D - 209 342 IPR027359 -
Prci201g0001 522 FunFam Two pore calcium channel protein 1 210 342 - -
Prci201g0001 522 CDD EFh 115 180 IPR002048 GO:0005509
Prci201g0001 522 FunFam Two pore calcium channel protein 1 1 101 - -
Prci201g0001 522 MobiDBLite consensus disorder prediction 474 490 - -
Prci201g0001 522 FunFam Two pore calcium channel protein 1 343 501 - -
Prci201g0001 522 SMART efh_1 156 184 IPR002048 GO:0005509
Prci201g0001 522 SMART efh_1 115 143 IPR002048 GO:0005509
Prci201g0001 522 Gene3D - 121 182 - -
Prci201g0001 522 SUPERFAMILY EF-hand 107 200 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci201g0001 1 520 Ion Channels AT4G03560 72.169 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci201g0001 K16900 - tcc:18608710 809.29