LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g4641	ATGTTTAAATTCTTGAAGGAGGTGGTGGGTGGATCTGGCAGCGGACTCAAAGATCTCCCTTATAATATCGGCCAACCTTACCCTTCTTCTTGGGGATCTTGGACTCACTATCGCGGCACCTCCAAGGACGATGGATCTCCAGTTTCAATCTTTTCTCTATCTGGGGTTAATGCTCAAGATGGATATCTAGCAGCTGGTCGAAATGGTGTTAAGCGTCTCCGGACAGTCAGGCATCCAAATATTTTGTCATTTCTTCATAGTACTGAGACTGAAACTTCTGATGGTGCTTCTTCCAAGGTTACAATCTATATTGTTACAGAGCCTGTCATGCCACTTTCAGAAAAGATTAAGGAGTTAGGACTAGAAGGTACACAAAGGGACGAATATTATGCTTGGGGGCTGCACCAAATAGCCAAGGCTGTGAGCTTCTTAAATAATGATTGCAAACTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTGGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTTTCAGAATTTGATGGAAGCAATGAAGCTTCTGCTGGGCAAATGCTGCAGTATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGTTGGCAAAGTCTGACTGGGCTGCAATCAGAAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGTCTTATCTATGAGCTATTCTCGGGTGTCAGTTTGGGTAAAACAGAGGAGTTACGCAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGCCTATTGAGTTCCATGCCATCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAATATTTTCAAAATAAGTTGGTAGATACAATACATTTCATGGAAATTCTTAGCTTGAAAGATAGTGTTGAGAAAGACACCTTCTTTCGCAAGCTTCCAAGTTTAGCAGAGCAGCTACCTCGCCAGATTGTGTTGAAGAAGTTGCTACCTTTGTTGGCTTCTGCTCTTGAATTTGGTTCAGCTGTTGCCCATGCTTTGACAGCATTGTTGAAAATGGGTTCCTGGCTTTCAGTTGAGGAGTTTAGTGTCAAGGTGCTTCCGACTATCGTAAAACTCTTTGCCTCCAATGACCGAGCTATTCGAGTTGCTCTTCTTCAACATATTGATCAATTTGGTGAGTCCTTATCAGCACAGGTTGTTGATGAGCAGGTTTATCCTCATGTTGCTACTGGGTTCTCTGACACGTCTGCTTTTCTGAGGGAACTTACACTTAAGGCCATGCTTATATTAGCTCCAAAGCTGTCTCAAAGGACCATCTCAGGGTCCTTGCTGAAATACCTGTCTAAGTTACAGGTTGATGAAGAACCAGCAATTCGAACAAATACAACCATCTTGCTAGGAAATATTGCAAGCTACCTAAATGAAGGGACTAGAAAAAGAGTTTTGATTAATGCATTTACTGTCCGGGCTTTACGGGATACTTTCCCCCCTGCTAGAGGAGCAGGCGTAATGGCTTTAAGTGCCACCAGCTCCTATTATGATATACCTGAAATTGCAACCCGGATACTTCCTAATGTTGTCGTACTTACAATTGATCCTGACAGTGATGTTCGATCCAAAGCATTTCAAGCCGTTGATCAATTTTTGCAGATAGTGAAGCAATGTTACGATAAGACAAATACAGCAGATACTACTGGAGCTGTTGGCATGGGAATTTCATCAGCTCCAGGAAATGCTAGTTTGCTTGGATGGGCTATGAGCTCCTTGACCCTTAAGGGCAAACCTTCTGACCATGCTCCTCTTGCTTCTGCAAGTACCAGCACAGTTGCATCAACATCTTCCAATTCCAGTTCAAGTGTGGACCCCCCATCAACAGCACCAGTCCGTGTAAGATCTACCTCTGATTTGGCTGAAACTGCTGTCCCTGCATCCCCTACATCAACAGATGGTTGGGGAGAACTGGAGAATGGAATTGAAGACCATGAAAATGACAAGGATGGTTGGGACGATCTGGAACCACTTGATGAGCCGAAGCCATCTTCAGCTCTTTCAAACATTCAAGCAGCTCAAAGGCGGCCAGTCTCTCAACCTGTTTCGCAGGCAAAGCATGCCTCAATTATGCGACCAAAAAGTGCGACAAAGTTGAGCAAGGATGAGGATGATGATTTGTGGGGTTCAATAGCAGTGCCTGCTCCTAAAACATCAAATCCTGCAGACGTGAAATCAACTGCTATTGATGATGATGATCCCTGGGCCGCCATTGCTGCACCAGCACCCACTACTAAAGCGAAGCCCTTATTGGCTAGCAGAGGTCGGGGAGTGAAACCTAGCGCTCCAAAATTAGGTGCGCACAGAATAAACCGGACATCATCTGGGATGTAA	2385	0.4444	MFKFLKEVVGGSGSGLKDLPYNIGQPYPSSWGSWTHYRGTSKDDGSPVSIFSLSGVNAQDGYLAAGRNGVKRLRTVRHPNILSFLHSTETETSDGASSKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNEASAGQMLQYAWLVGSQYKPMELAKSDWAAIRKSPPWAIDSWGMGCLIYELFSGVSLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPSLAEQLPRQIVLKKLLPLLASALEFGSAVAHALTALLKMGSWLSVEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQFGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKAMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGVMALSATSSYYDIPEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQIVKQCYDKTNTADTTGAVGMGISSAPGNASLLGWAMSSLTLKGKPSDHAPLASASTSTVASTSSNSSSSVDPPSTAPVRVRSTSDLAETAVPASPTSTDGWGELENGIEDHENDKDGWDDLEPLDEPKPSSALSNIQAAQRRPVSQPVSQAKHASIMRPKSATKLSKDEDDDLWGSIAVPAPKTSNPADVKSTAIDDDDPWAAIAAPAPTTKAKPLLASRGRGVKPSAPKLGAHRINRTSSGM	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g4641	794	ProSiteProfiles	HEAT repeat profile.	366	404	IPR021133	-
	Prci1g4641	794	SUPERFAMILY	ARM repeat	293	555	IPR016024	-
	Prci1g4641	794	Gene3D	Transferase(Phosphotransferase) domain 1	109	280	-	-
	Prci1g4641	794	MobiDBLite	consensus disorder prediction	757	794	-	-
	Prci1g4641	794	MobiDBLite	consensus disorder prediction	655	677	-	-
	Prci1g4641	794	ProSiteProfiles	Protein kinase domain profile.	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g4641	794	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	8	773	-	-
	Prci1g4641	794	SMART	serkin_6	37	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g4641	794	MobiDBLite	consensus disorder prediction	681	703	-	-
	Prci1g4641	794	Gene3D	Phosphorylase Kinase; domain 1	12	107	-	-
	Prci1g4641	794	Gene3D	-	282	558	IPR011989	-
	Prci1g4641	794	MobiDBLite	consensus disorder prediction	601	652	-	-
	Prci1g4641	794	MobiDBLite	consensus disorder prediction	596	720	-	-
	Prci1g4641	794	SUPERFAMILY	Protein kinase-like (PK-like)	34	287	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g4641	Prci-Chr1	59545340	59576073	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL1	Prci1g4641		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g4641	K08876		-	gmx:100782748	1298.11