Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4626 ATGGGATTGATCGCGGAGGACGGGGGTGACCGCCACATTGTGCTTCCGCCGCCCAATTTCTCGATGGTCGAGGACAACATTTTTCGATCAGCCTTCCCTCGACCTCCCAATTTTCCCTTCCTCCAAACCCTAAACCTTCGATCTATCATATACTTGTGTCCCGAACCATATCCACAAGAAAATTTGGAATTTCTTCGGTCACAGGACATTCGACTCTTTCAGTTTGGAATTGAGGGGAAGACGGAGGTTTCAGGACCTATTCTGAAGGATTCTATCATGGACGCTCTGAAAGTCTTAATTGATGTGAGAAATCACCCCCTTTTAATACATTGCAAACAAGGAAAGCATCGAACGGGTTGCCTGGTAGGTTGCTTAAGAAAATTGCAGAAGTGGTGTCTGTCTTCAGTGTTCGAGGAGTACAACAGATTTGCTGGTGCCAAATCGAGGATAGCGGATTTAAGATTTATAGAATCGTTTGACATATTATGCCTGAGGCAGTGCCTTTACAGCATCATATACCAGTACCAAGGATATAATTCAACCAAGAGGCGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCCCAGATGACAACCGTTTAG 603 0.4444 MGLIAEDGGDRHIVLPPPNFSMVEDNIFRSAFPRPPNFPFLQTLNLRSIIYLCPEPYPQENLEFLRSQDIRLFQFGIEGKTEVSGPILKDSIMDALKVLIDVRNHPLLIHCKQGKHRTGCLVGCLRKLQKWCLSSVFEEYNRFAGAKSRIADLRFIESFDILCLRQCLYSIIYQYQGYNSTKRRLLYKEENLQKPQMTTV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4626 200 Gene3D Protein tyrosine phosphatase superfamily 14 163 IPR029021 -
Prci1g4626 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 174 IPR020422 GO:0006470|GO:0008138
Prci1g4626 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 160 IPR029021 -
Prci1g4626 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 173 - -
Prci1g4626 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Prci1g4626 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Prci1g4626 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Prci1g4626 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Prci1g4626 200 FunFam probable tyrosine-protein phosphatase At1g05000 13 163 - -
Prci1g4626 200 Pfam Tyrosine phosphatase family 14 161 IPR004861 -
Prci1g4626 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4626 Prci-Chr1 59456997 59459090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4626 1 196 Protein tyrosine phosphatase (PTP) family AT3G02800 67.005 7.09e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4626 K18045 - qsu:112008997 328.561