Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4618 ATGCGCCTGCCCACTGATAACTTCCAAAATGATACGTACGAGAAGGCAGGAGAAATGAGAAAAACAAGGAGGAAATTGAAAGGAGCGGTGATGTCTCCCCACCTTTGTCGCTGGATCCCTCTGAGACTTGTTCCCAATGTTAACCATCGCTCACTCATTTTGTTTTGCCTCCTCAAACATGCGACATGGCTTCCTCCTCTTTTCTTCGCCCTCTTGTCCCTTCTTCCCCATAGCTTCTTCTTCCCTCACTCGCAGGGTCCTTCAATCTTTTTTGGGGGACCCTTCGCCCCTCCCCTTTCTTTAACTCCCTTTCTTTTCTCCTCTCTTCTTTTCTGTTTCTCCCTACCTTTCTTTTTTCTTCAATTTTCTCTCGCCTTAGATGTTTGCACCGCTTTCACTATGAATTGTTTCTCGTGTTTCACCTCCCAGAAAAGTAAGAAAAACCTTGGCGGGGGAGACCTTGAATCCGCACCCCAGGATCATCATGTCGCTTCAAAACCGCTGGATAATGGAAACCAAGGTCAGAGCCCAAATATTCAAGCGCAAGCGTTCACTTTCCGCGAGCTGGCCACCGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAGGGTGGATTCGGAAGAGTGTACAAGGGCACCATTCCGGCGACCGGCAAGGTGGTAGCTGTGAAGCAATTGGACCGAAACGGGATGAATGGCAGCAAGGATTTTCTGACAGAGGTTGCAGTTTTGAGTCGCCTGAACCATGAAAACCTGGTGAATCTAGTTGGTTACTGTGCCGATGGGGATCAACGTCTCCTGGTGTATGAGTACATGCCGGGGGGCTCTGTATACGATCGTCTTTTTGAGGAAGGCGAGTCTCCACTGGATTGGTTCAACAGAATGAAAATAGCGTCGGGAGCAGCGAGAGGACTGGAGTATTTGCACGACAAGGCCAATCCCCCAGTTGTTTACAGGGACTTGAAATCCTCGAATATATTGCTGGACGATGATCTTAACCCCAAATTATCTGATTTTGGGCTCAACAAGCTTTCCAGGGGAGACAGGACAAATATCATATCCCCCGGAGTTATGGGTACTTATGGCTACTCTGCTCCCGAGTACGTAAGGACCGGACACCTCACCTTGAAATCAGATGTCTACGGTTTTGGAGTTGTGCTGCTAGAGCTCATCACCGGACGACGAGCCATTGATACTACCAAACCCAACGAGGAGCAAAATTTAGTTTCATGGGCACAGCCCTTATTCAGAAATCCAAAACAATTCCCGGAAATCGCAGATCCGCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTAGCAGTGGCGGCCATGTGCCTCCAGGAGGAGGAAGGGGCGAGGCCTTTGATGAGCGACGTGGTGATGGCTCTGAGTTTCTTGTCCATGGTTCCGCCGGAGGTAATTCCAGCATCGGTGTCGCCGGCCACCTTGCCCCCACAGGATGACGGCTCAGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGATTCTGACGGGACGGGACGGAAATCAAGCCGCAGAAGCAGCATGAGCTGGGAAGAGGGAAGTGTGTCATCAAGCAAGAAATCGCGAAATTTAAACAAGAAGAAAAGCAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGTGGGGGGAAAGTGTCGAGCAGAAAGAGCAGTAGAAAATCATCGAGAAGCAGGAAGATGAGCACGGAGTGGGAGGAAGGTGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCACGATGTCTCAGAGAGATATGTCGTTTGGGCTCATCAGCAGCGGGGAAAGCGTTCGCAGCGACGGCGGCGGCGACTACAGCGACAGCGACAGGGGCTCGACGGAAGGGGCCCACCAGCGGCTGCAGCACGCCCATACTGCCAAACAGCCTCCCAAGGATCCCCACAGGGAACGACTCACCGCCTCTAGCGCTAAAGTATGA 1992 0.5206 MRLPTDNFQNDTYEKAGEMRKTRRKLKGAVMSPHLCRWIPLRLVPNVNHRSLILFCLLKHATWLPPLFFALLSLLPHSFFFPHSQGPSIFFGGPFAPPLSLTPFLFSSLLFCFSLPFFFLQFSLALDVCTAFTMNCFSCFTSQKSKKNLGGGDLESAPQDHHVASKPLDNGNQGQSPNIQAQAFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVAVKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMPGGSVYDRLFEEGESPLDWFNRMKIASGAARGLEYLHDKANPPVVYRDLKSSNILLDDDLNPKLSDFGLNKLSRGDRTNIISPGVMGTYGYSAPEYVRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEIADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVMALSFLSMVPPEVIPASVSPATLPPQDDGSEEEEEEGEGEGEGEGEDSDGTGRKSSRRSSMSWEEGSVSSSKKSRNLNKKKSSSRDLKQKSSKKGGGKVSSRKSSRKSSRSRKMSTEWEEGGGEGMHERGSSTMSQRDMSFGLISSGESVRSDGGGDYSDSDRGSTEGAHQRLQHAHTAKQPPKDPHRERLTASSAKV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4618 663 MobiDBLite consensus disorder prediction 575 591 - -
Prci1g4618 663 ProSiteProfiles Protein kinase domain profile. 196 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4618 663 MobiDBLite consensus disorder prediction 492 510 - -
Prci1g4618 663 MobiDBLite consensus disorder prediction 620 663 - -
Prci1g4618 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Prci1g4618 663 SUPERFAMILY Protein kinase-like (PK-like) 176 473 IPR011009 -
Prci1g4618 663 MobiDBLite consensus disorder prediction 511 525 - -
Prci1g4618 663 PANTHER OS07G0668900 PROTEIN 156 474 - -
Prci1g4618 663 MobiDBLite consensus disorder prediction 560 574 - -
Prci1g4618 663 MobiDBLite consensus disorder prediction 150 174 - -
Prci1g4618 663 Gene3D Phosphorylase Kinase; domain 1 168 272 - -
Prci1g4618 663 MobiDBLite consensus disorder prediction 481 663 - -
Prci1g4618 663 SMART serkin_6 196 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4618 663 FunFam probable serine/threonine-protein kinase RLCKVII 168 272 - -
Prci1g4618 663 MobiDBLite consensus disorder prediction 594 612 - -
Prci1g4618 663 FunFam Serine/threonine-protein kinase PBS1 273 482 - -
Prci1g4618 663 Gene3D Transferase(Phosphotransferase) domain 1 273 474 - -
Prci1g4618 663 CDD STKc_IRAK 202 465 - -
Prci1g4618 663 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524
Prci1g4618 663 Pfam Protein kinase domain 198 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4618 Prci-Chr1 59405639 59408410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4618 134 541 Glycoside Hydrolase AT3G07070 56.410 8.03e-153 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci1g4618 Pkinase 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4618 - - pcin:129308805 1144.8