Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4617 ATGAGGATTCCGAACTTGGTGTCCATTGCCCTCATATTCGTGCTCTTCCAAAACTCCTTCCCCCGGGCTGCGCCTCAATGCGCCCTCAATTTGAGCTCTTACCCCTACGTGGCTTACCAGGAGTGCGGTCGGGTGCAGGATCAGATTGATCGCTGGGACGGTTTCCCCTCCACCTTCTGCTGCCGCAATGCCCTCACCGTCTTCGCCCAGGCTTTGGCCCTGCGAGCCCGCTCTTCCCCCCAACAGGGCTCCCTCTTCATTTCCCACGCTGAATGGGTCGCCTGCACCGACGCCTTTCGTCTCCGGCACGGCGTGTCCCCCACTTCCTGCGGCTTCCCCGACTTGTACCTGGGCGCCTCCAAGTGCTCCTCCCTCACGCTCCAGGACCTTCAGGGCCAGCAGTTCTACCAGAGCACCCTCGACGAATGCGCCCACTTCGATCATCCCTCTCGAGATTCTTGTTCCAATTGCGTCACCGCCGTCCTCACTATCCGAGACTCTCTCTACAACCAATTCGTCGGCAGGCAGGACCTTCCCGTCGAAAGAGCCATTTGTGGTGTGGCGGCTCTTGTTTCCGTTGCTGCCGGCAAACCCGACGATCCTTCCATTCCGGACAAGTTCTTGCGTTGCTGGCCTCCTCCCCCAATTAACGATCACCCTGCAGGCTTCCTCAAATCTTTTTCGGCAGGGTTCCTCATAGCGCTGTCTGCGGTGATTGCGATGGCCTTGATGGCAATACTGGTGGGAAGTTTGTGGCAGAAGAAGCCTCGGAATGCGGCGGCGTTGAAAGAAATAACGATGTGGTCGGGCATGTACTGGTTCTCGAGAGCAGAGATAGAGAATGCCATAAACTACGGGAACGAGAGGAAGTGCTTGGGAAGGGGGAGTGCGGGACAGGTGTTCAAAGGGGTTCTGCCCAGCGGTCAAGTGGTGGCCATCAAGCACCTGAACAAAACCAACAGCTCTGATTCTTTCACTCGGGAAGTGGAGGGCCTCTCCAGGCTTCGCCATCCCAATCTGGTTTGCCTCTTTGGGTGTTGCATTGAAGATGGGGAGAGATATTTAGTGTATGAATACTGTGCAGAAGGCAATCTAGCGCAACATCTCTTGAGAAGAGACAGCCATTTGACGTGGGAGACAAGAGTTAGGATCTTACGGGACTGCTCCTTCGCTCTCAAATATCTGCACCATCATGTTGAGGGCTGCGTTGTCCATAGAGATATCAAGGCGAGAGATGTGAGCATGGGGAAGCGGCCAACATCGGATTTTGAAGATCCAAGGCTAAAGGGACAAGTAAATGTGGCGGACTTTGAGGCCATCTTACATATTGCAGTTCTGTGTGTTGCCAAATCAAGCAAAGGCCGCCCAACCATTGAGGTTGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACTCTTGCCCAATCGAAAGCAACGCAGGATCGGAGTGGATCCGGAACATCCAACTCTACATCCTCCGATCGATTTGATTATTCCTTAACACAAAGGCATTAG 1515 0.5413 MRIPNLVSIALIFVLFQNSFPRAAPQCALNLSSYPYVAYQECGRVQDQIDRWDGFPSTFCCRNALTVFAQALALRARSSPQQGSLFISHAEWVACTDAFRLRHGVSPTSCGFPDLYLGASKCSSLTLQDLQGQQFYQSTLDECAHFDHPSRDSCSNCVTAVLTIRDSLYNQFVGRQDLPVERAICGVAALVSVAAGKPDDPSIPDKFLRCWPPPPINDHPAGFLKSFSAGFLIALSAVIAMALMAILVGSLWQKKPRNAAALKEITMWSGMYWFSRAEIENAINYGNERKCLGRGSAGQVFKGVLPSGQVVAIKHLNKTNSSDSFTREVEGLSRLRHPNLVCLFGCCIEDGERYLVYEYCAEGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHHHVEGCVVHRDIKARDVSMGKRPTSDFEDPRLKGQVNVADFEAILHIAVLCVAKSSKGRPTIEVVFEELDKAYKNTLAQSKATQDRSGSGTSNSTSSDRFDYSLTQRH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4617 504 FunFam Cysteine-rich receptor-like protein kinase 40 259 359 - -
Prci1g4617 504 ProSiteProfiles Protein kinase domain profile. 286 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4617 504 MobiDBLite consensus disorder prediction 474 504 - -
Prci1g4617 504 Gene3D Transferase(Phosphotransferase) domain 1 358 457 - -
Prci1g4617 504 Pfam Protein tyrosine and serine/threonine kinase 290 437 IPR001245 GO:0004672|GO:0006468
Prci1g4617 504 MobiDBLite consensus disorder prediction 474 497 - -
Prci1g4617 504 Gene3D Phosphorylase Kinase; domain 1 258 357 - -
Prci1g4617 504 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 121 413 - -
Prci1g4617 504 SUPERFAMILY Protein kinase-like (PK-like) 264 413 IPR011009 -
Prci1g4617 504 Pfam SPARK 24 168 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4617 Prci-Chr1 59402025 59404835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4617 229 413 Receptor kinase-like Gene Family AT1G53430 36.979 2.66e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Prci1g4617 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4617 - - gmx:100807158 476.092