Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4616 ATGAGGATTCCGAACTTGGTGTCCATTGCCCTCATATTCGTGCTCTTCCAAAACTCCTTCCCCCGGGCTGCGCCTCAATGCGCCCTCAATTTGAGCTCTTACCCCTACGTGGCTTACCAGGAGTGCGGTCGGGTGCAGGATCAGATTGATCGCTGGGACGGTTTCCCCTCCACCTTCTGCTGCCGCAATGCCCTCACCGTCTTCGCCCAGGCTTTGGCCCTGCGAGCCCGCTCTTCCCCCCAACAGGGCTCCCTCTTCATTTCCCACGCTGAATGGGTCGCCTGCACCGACGCCTTTCGTCTCCGGCACGGCGTGTCCCCCACTTCCTGCGGCTTCCCCGACTTGTACCTGGGCGCCTCCAAGTGCTCCTCCCTCACGCTCCAGGACCTTCAGGGCCAGCAGTTCTACCAGAGCACCCTCGACGAATGCGCCCACTTCGATCATCCCTCTCGAGATTCTTGTTCCAATTGCGTCACCGCCGTCCTCACTATCCGAGACTCTCTCTACAACCAATTCGTCGGCAGGCAGGACCTTCCCGTCGAAAGAGCCATTTGTGGTGTGGCGGCTCTTGTTTCCGTTGCTGCCGGCAAACCCGACGATCCTTCCATTCCGGACAAGTTCTTGCGTTGCTGGCCTCCTCCCCCAATTAACGATCACCCTGCAGGCTTCCTCAAATCTTTTTCGGCAGGGTTCCTCATAGCGCTGTCTGCGGTGATTGCGATGGCCTTGATGGCAATACTGGTGGGAAGTTTGTGGCAGAAGAAGCCTCGGAATGCGGCGGCGTTGAAAGAAATAACGATGTGGTCGGGCATGTACTGGTTCTCGAGAGCAGAGATAGAGAATGCCATAAACTACGGGAACGAGAGGAAGTGCTTGGGAAGGGGGAGTGCGGGACAGGTGTTCAAAGGGGTTCTGCCCAGCGGTCAAGTGGTGGCCATCAAGCACCTGAACAAAACCAACAGCTCTGATTCTTTCACTCGGGAAGTGGAGGGCCTCTCCAGGCTTCGCCATCCCAATCTGGTTTGCCTCTTTGGGTGTTGCATTGAAGATGGGGAGAGATATTTAGTGTATGAATACTGTGCAGAAGGCAATCTAGCGCAACATCTCTTGAGAAGAGACAGCCATTTGACGTGGGAGACAAGAGTTAGGATCTTACGGGACTGCTCCTTCGCTCTCAAATATCTGCACCATCATGTTGAGGGCTGCGTTGTCCATAGAGATATCAAGCTCACAAACATACTGTTGACTGAGAGTTTGCAAGCTAAACTGTCGGATTTTGGGTTGGCAAAGATGTTGGGGATGGAAGAGAGCCAAGTGTTCACGGATGTAAGGGGAACCGTAGGGTATATGGATCCAGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGTGATATTTACAGTTTTGGAATAGTTGCCTTACAAATTCTATCGGGTCAGAAGGTGATAGAGTTAGATCTTGATGCCAGAGATCAACTCACTAGGAAGGCGAGAGATGTGAGCATGGGGAAGCGGCCAACATCGGATTTTGAAGATCCAAGGCTAAAGGGACAAGTAAATGTGGCGGACTTTGAGGCCATCTTACATATTGCAGTTCTGTGTGTTGCCAAATCAAGCAAAGGCCGCCCAACCATTGAGGTTGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACTCTTGCCCAATCGAAAGCAACGCAGGATCGGAGTGGATCCGGAACATCCAACTCTACATCCTCCGATCGATTTGATTATTCCTTAACACAAAGGCATTAG 1776 0.5253 MRIPNLVSIALIFVLFQNSFPRAAPQCALNLSSYPYVAYQECGRVQDQIDRWDGFPSTFCCRNALTVFAQALALRARSSPQQGSLFISHAEWVACTDAFRLRHGVSPTSCGFPDLYLGASKCSSLTLQDLQGQQFYQSTLDECAHFDHPSRDSCSNCVTAVLTIRDSLYNQFVGRQDLPVERAICGVAALVSVAAGKPDDPSIPDKFLRCWPPPPINDHPAGFLKSFSAGFLIALSAVIAMALMAILVGSLWQKKPRNAAALKEITMWSGMYWFSRAEIENAINYGNERKCLGRGSAGQVFKGVLPSGQVVAIKHLNKTNSSDSFTREVEGLSRLRHPNLVCLFGCCIEDGERYLVYEYCAEGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHHHVEGCVVHRDIKLTNILLTESLQAKLSDFGLAKMLGMEESQVFTDVRGTVGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPTSDFEDPRLKGQVNVADFEAILHIAVLCVAKSSKGRPTIEVVFEELDKAYKNTLAQSKATQDRSGSGTSNSTSSDRFDYSLTQRH 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4616 591 Gene3D Phosphorylase Kinase; domain 1 258 359 - -
Prci1g4616 591 Gene3D Transferase(Phosphotransferase) domain 1 361 579 - -
Prci1g4616 591 MobiDBLite consensus disorder prediction 561 591 - -
Prci1g4616 591 Pfam Protein kinase domain 289 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4616 591 FunFam probable receptor-like protein kinase At5g59700 360 570 - -
Prci1g4616 591 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 122 559 - -
Prci1g4616 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Prci1g4616 591 MobiDBLite consensus disorder prediction 561 584 - -
Prci1g4616 591 Pfam SPARK 24 168 IPR043891 -
Prci1g4616 591 FunFam Cysteine-rich receptor-like protein kinase 40 259 359 - -
Prci1g4616 591 SUPERFAMILY Protein kinase-like (PK-like) 264 552 IPR011009 -
Prci1g4616 591 SMART serkin_6 286 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4616 591 ProSiteProfiles Protein kinase domain profile. 286 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4616 Prci-Chr1 59402025 59404835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4616 234 568 Receptor kinase-like Gene Family AT2G19230 35.398 2.90e-54 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Prci1g4616 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4616 - - gmx:100807158 731.095