Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4604 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCAGCAACAGCAGGCCACCACCTCCGCCGCCGCCCCCGCCACCTCCTCCCCGACCAATGGCCTCTTGCCCAACACTGACGCCTCCCACATGGTCTTCCCTCATTCCGTGCCCTCCGCGGTCTCCTCTCAATTAGAACCCCCCAAGAGGAAGAGGGGCAGGCCCAGGAAGTACGGCACCCCCGAGCAAGCTCTAGCCGCCAAGAAGGCTGCCACCTCGTCCTCTCACCCTTTCAACAGGGATAAGAAGGGCCACGCTCTGGGCAGCCCCTCTGCTTCGTCTTCGTACACCGGCTCCTCCAAGAAATCCCAGTTCTCTTCTCTGGGTCAAGGCTTCACGCCACACGTCATTACTGTTGCTGCTGGTGAGGATGTTGGGCAAAAAATTATGTTGTTCATGCAACAAAGTAGGCGTGAAATGTGCATCTTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCTGCAACCTCAGGAGGCAATATTGCATATGAGGGTCGATTTGAGATTATTTCATTATCTGGTTCCTATGTCCGTACTGAACTTGGAGGGCGTACTGGTGGTCTTAGTGTGTGCTTATCAAGTACCGATGGTCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTGATTGTTGGTACATTTTTTCTGGATGCCAAGAAGGATGCCGGAGCTAGTGCTGGTGTAAAAGGTGATGCTTCTGGGAGCAAGGTGGCATCATTGGTTGGGGAGTCGGTATCAAGTTTAGGTTACCAGCCGGGCGTTGAATCTTCCAGCGGGAATCCAATTCGCAGAAATGATGATGATCATCATGCTGTTGGTGGGAGTCATTTCATGATTCAACAACGTGGTGTGCATGTGACGCCTTCCCAGCCCACAGAGTGGTGGGCTCGTCCTGATTCCAGAAATGCTGGCTTTGAACAAATGACAGGAAAAACAGGCCATGGGGGTCATCAGTCTCCAGAGAACGGAGATTATTTAACATGA 1053 0.5252 MEPNENQLSSYFHHQQQQATTSAAAPATSSPTNGLLPNTDASHMVFPHSVPSAVSSQLEPPKRKRGRPRKYGTPEQALAAKKAATSSSHPFNRDKKGHALGSPSASSSYTGSSKKSQFSSLGQGFTPHVITVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNIAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDAGASAGVKGDASGSKVASLVGESVSSLGYQPGVESSSGNPIRRNDDDHHAVGGSHFMIQQRGVHVTPSQPTEWWARPDSRNAGFEQMTGKTGHGGHQSPENGDYLT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4604 350 MobiDBLite consensus disorder prediction 1 117 - -
Prci1g4604 350 MobiDBLite consensus disorder prediction 101 117 - -
Prci1g4604 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 237 IPR005175 -
Prci1g4604 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 237 - -
Prci1g4604 350 Gene3D - 127 252 - -
Prci1g4604 350 CDD DUF296 126 237 IPR005175 -
Prci1g4604 350 MobiDBLite consensus disorder prediction 307 350 - -
Prci1g4604 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 262 IPR039605 GO:0003680
Prci1g4604 350 MobiDBLite consensus disorder prediction 1 39 - -
Prci1g4604 350 MobiDBLite consensus disorder prediction 272 295 - -
Prci1g4604 350 ProSiteProfiles PPC domain profile profile. 122 264 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4604 Prci-Chr1 59260480 59265755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4604 19 348 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 52.528 1.79e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4604 - - qsa:O6P43_007692 448.743