Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4598 ATGGACCAATCAATTCTCGATGACATAATCAATCGCCTCCTTGAAGTCCGCGGTCGTCCGGGCAAGCAGGTTCAGTTGTCGGAGTCCGAGATCCGTCAGCTTTGCCTTGTTTCCAGAGATATTTTCTTGCAACAGCCTAATTTATTGGAGCTTGAAGCACCCATTAAGATTTGTGGCGATGTACATGGTCAATATTCTGATCTTTTGCGTCTATTTGAGTATGGTGGATTACCTCCGCATGCCAACTATTTATTTTTAGGGGATTATGTGGACCGAGGGAAGCAGAGTTTGGAAACAATATGCCTTCTTCTTGCTTACAAAATAAAATATCCTGAAAACTTTTTCCTGTTGAGGGGGAACCATGAATGTGCTTCTATAAACCGCATATATGGATTTTATGATGAGTGTAAGAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACTGAGTGTTTCAACTGCCTACCTGTGGCAGCCCTTATTGATGAAAAGATTCTGTGTATGCATGGGGGACTTTCTCCTGACTTGCATAATTTGGATCACATCAGAAATCTGCAGCGTCCAACTGATGTACCAGATACAGGTTTGCTTTGTGATCTTCTTTGGTCAGACCCGAGCAAAGATGTTCAAGGATGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTGTCAGAATTTCTTCAGAAACAAGATCTGGATCTTATTTGTCGTGCTCATCAGGTTGTGGAGGATGGTTATGAGTTCTTTGCTGACCGACAGCTAGTAACAATATTTTCAGCACCTAATTATTGTGGAGAGTTTGACAACGCTGGTGCTATGATGAGTGTTGATGAGACGCTAATGTGCTCTTTCCAAATATTAAAGCCAGCGGATAAAAAGCCAAAGATCAATTTTGGAAGTAGTACAACAACTGCTAAGCCTGGAAGTTCTCCAGCAGGTATAAAGGTAAAAAGTTAG 972 0.4146 MDQSILDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSRDIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDHIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKQDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKINFGSSTTTAKPGSSPAGIKVKS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4598 323 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Prci1g4598 323 Gene3D - 1 305 IPR029052 -
Prci1g4598 323 FunFam Serine/threonine-protein phosphatase 52 305 - -
Prci1g4598 323 SUPERFAMILY Metallo-dependent phosphatases 21 298 IPR029052 -
Prci1g4598 323 SMART pp2a_7 26 296 IPR006186 GO:0016787
Prci1g4598 323 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Prci1g4598 323 CDD MPP_PP1_PPKL 6 294 - -
Prci1g4598 323 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 299 - -
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Prci1g4598 323 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Prci1g4598 323 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Prci1g4598 323 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4598 Prci-Chr1 59229005 59236337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4598 33 239 Calmodulin-binding Proteins AT5G63870 31.048 2.29e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4598 K06269 - gmx:100799218 627.476