Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4596 ATGCCTTGTTTATTGCTTCATACAAAAGCAAACGCGACGCAACAAGGACGGGCGAAGCGAGGAGTAGAAGCAGCAAACAGCACGTCGATGACGACGAAACCGCACACAAGAGAGCAGAGCAGAGAGATGGAGGAGATCCTTCGGAATAACCACTACGAATTGTGCGATGAGATCGGACGTGGCAGATTCGGCGTCATCTTCCGCTGCATTCACCTTCTCTCCGGTCAGCTCTATGCCTGCAAACTCATCGACAAGCGCCTCCTATCCGATCCCACCGATCGCTCTTGCCTAGACAACGAGCCCAAATACATGTCTCTCCTCTCTTCTCACCCCAACATTCTTCAGATCTTCGACGTCTTCCACCACGACCACTTCCTGTCCATCGTCCTCGAGCTCTGTCACCCCCACACCCTCCTCAACCGCATCATCGCTCGCCCCTTCCCAGAGACGGAAGCCGTTTCTATCATGAAGCAGCTCCTCGAAGCCCTAGCTCACTGCCACCGACTCGGCATAGCCCACAGAGACATTAAGCCCGACAATCTCTTGTTTAATTCCGCCAATAATCTCAAGGTTGCCGACTTTGGGTCCGCACAGTGGTTCGGCGACGGAAGAAGCATGAGAGGAGTGGTCGGCACGCCTTACTATGTAGCGCCGGAGGTATTACTGGGCAGAGACTACAATGAGAAAGTAGATGTGTGGAGCAGCGGCGTGGTTTTGTACATAATGTTGGCCGGGGTTCCTCCCTTCCACGGGGAATCGGCGGCCGAGATATTCGAGGTTGTGGTCAGGGCGAATCTGAGGTTCCCTTCCGGGACTTTCAGGTCCGTGTCTCCCTCTGCTAAGGATCTCCTCAGGAAGATGATCTGCAGGGATGTTTCCAGGAGATTATCGGCAGAGCAGGCCCTGGGGCATCCATGGATCCAGAGCGGAGGAGAGAAGACGGATCTGACGTGA 954 0.5461 MPCLLLHTKANATQQGRAKRGVEAANSTSMTTKPHTREQSREMEEILRNNHYELCDEIGRGRFGVIFRCIHLLSGQLYACKLIDKRLLSDPTDRSCLDNEPKYMSLLSSHPNILQIFDVFHHDHFLSIVLELCHPHTLLNRIIARPFPETEAVSIMKQLLEALAHCHRLGIAHRDIKPDNLLFNSANNLKVADFGSAQWFGDGRSMRGVVGTPYYVAPEVLLGRDYNEKVDVWSSGVVLYIMLAGVPPFHGESAAEIFEVVVRANLRFPSGTFRSVSPSAKDLLRKMICRDVSRRLSAEQALGHPWIQSGGEKTDLT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4596 317 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 312 - -
Prci1g4596 317 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Prci1g4596 317 FunFam Maternal embryonic leucine zipper kinase 40 313 - -
Prci1g4596 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Prci1g4596 317 PIRSF ILK 7 299 - -
Prci1g4596 317 MobiDBLite consensus disorder prediction 15 34 - -
Prci1g4596 317 ProSiteProfiles Protein kinase domain profile. 52 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4596 317 CDD STKc_CAMK 51 306 - -
Prci1g4596 317 MobiDBLite consensus disorder prediction 15 40 - -
Prci1g4596 317 SUPERFAMILY Protein kinase-like (PK-like) 44 309 IPR011009 -
Prci1g4596 317 Gene3D Phosphorylase Kinase; domain 1 21 134 - -
Prci1g4596 317 SMART serkin_6 52 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4596 317 Pfam Protein kinase domain 52 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4596 317 Gene3D Transferase(Phosphotransferase) domain 1 136 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4596 Prci-Chr1 59224695 59226327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4596 52 315 EF-hand Containing Proteins AT3G20410 40.672 6.31e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci1g4596 Pkinase 2.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4596 - K08794 pcin:129307338 647.121