Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g4574 | ATGCTTTCGTCACCTTCTAAATGCCTGAATGACATCTCTTTTTCCTCAATTTCACAACATGATAGGCAGTATCAAGGTTCTCCCTTCATTTCTAAGACATTGAGAAGAGATGATGTGATGCCCTGGCTAGGAGCTTCCCTTACTCAGAGTGGGGAAGATGCTTCTTTCCCACCTTCACATTCTTCTCATCCAGAAATACATTTGGCAGCGTGCATTTCTCAACCCCCGGAAAGTGATGATATTCCCTGGGGACCAGATCCCTTTCAGGATATTCTTGATCTCTCTGCAAATGATTCCATCCAGAATGATCAGATGGAAAGTAGTTCTTGTTATATGTCTGATGACAACACCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATGTCAGTTGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAATGTACCAGATTCAAAACCAAAGGAGCCCGATGCCACCAAGCAGCAGCATGCACCATCTGGAGAAGTCAGTGCTCCTCCTACTTCAGCATCGAATGCGCTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTGGCGAGAAGGCTACTCCAAAGGGTGTTTTGAATCTAATGAAAATTGAGGCTCTTACTATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGCTTCTGAGAACAAATCGACAACCAAAGAAATGAAATCTTCAGACTTGAGAGCTAGCATGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTCCATGAACAACTTGAGGTTCAAAGGAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGTCTTCAGGTGATGTTTGAGAAACAAAGAGAGATGGAGGACAGCAAACACATGACATCATCATCCTCCTTGGACAGGCCCACGGTATTAACTTCCCACACAAGTGAGGGTCAAGAAACCTTAAATGAGGGTCAGGAAAAATCTGGAGTCAGCAATATCAATGCAAGAATCATGGACAAAGAATGTTCTGAGGATGCCTGCACAAGGCAAGAAGTGGAAGAAACTAAAGTTACTAATGAAGAAGAGGCGGGGTATGATCAGTTGGGTGCACCAGCCTCCAAACGGGTGAAAAGTAGATGA | 1209 | 0.4409 | MLSSPSKCLNDISFSSISQHDRQYQGSPFISKTLRRDDVMPWLGASLTQSGEDASFPPSHSSHPEIHLAACISQPPESDDIPWGPDPFQDILDLSANDSIQNDQMESSSCYMSDDNTKKTDFGEWVDQLMSVDESPHPNWSQLLVDDNVPDSKPKEPDATKQQHAPSGEVSAPPTSASNALQSKPRMRWTPELHEAFVEAVNKLGGGEKATPKGVLNLMKIEALTIYHVKSHLQKYRTARFKPESSGGASENKSTTKEMKSSDLRASMGITEALRLQMELQKRLHEQLEVQRKLQIQIENQGKRLQVMFEKQREMEDSKHMTSSSSLDRPTVLTSHTSEGQETLNEGQEKSGVSNINARIMDKECSEDACTRQEVEETKVTNEEEAGYDQLGAPASKRVKSR | 402 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g4574 | 402 | SUPERFAMILY | Homeodomain-like | 182 | 238 | IPR009057 | - | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 136 | 183 | - | - | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 324 | 355 | - | - | |
Prci1g4574 | 402 | FunFam | Myb family transcription factor | 183 | 241 | - | - | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 164 | 183 | - | - | |
Prci1g4574 | 402 | Pfam | Myb-like DNA-binding domain | 186 | 237 | IPR001005 | - | |
Prci1g4574 | 402 | Gene3D | - | 183 | 242 | - | - | |
Prci1g4574 | 402 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 181 | 241 | IPR017930 | - | |
Prci1g4574 | 402 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 180 | 368 | IPR044848 | GO:0003700 | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 314 | 402 | - | - | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 240 | 262 | - | - | |
Prci1g4574 | 402 | Pfam | MYB-CC type transfactor, LHEQLE motif | 268 | 314 | IPR025756 | - | |
Prci1g4574 | 402 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 184 | 238 | IPR006447 | GO:0003677 | |
Prci1g4574 | 402 | MobiDBLite | consensus disorder prediction | 361 | 384 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g4574 | Prci-Chr1 | 59103616 | 59108240 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g4574 | 1 | 355 | G2-like Transcription Factor Family | AT3G04450 | 40.554 | 2.55e-70 | 225 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Prci1g4574 | Myb_DNA-binding | 1.4e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g4574 | - | - | pcin:129312811 | 796.193 |