Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4572 ATGTCTCCATCTTTTCCTCTTCTTCCCACTCGTATTGAAGACAAATATATGAAACCCGCAGATTCTTTTTCCTCTGCTGCACGAGACCTGACTGCAAATCCTGCATCAGTGCAGGCTTTTTCATCAAATTCCAACCTGAGAAGTGGAGGGCACATGCTTTCGTCACCTTCTAAATGCCTGAATGACATCTCTTTTTCCTCAATTTCACAACATGATAGGCAGTATCAAGGTTCTCCCTTCATTTCTAAGACATTGAGAAGAGATGATGTGATGCCCTGGCTAGGAGCTTCCCTTACTCAGAGTGGGGAAGATGCTTCTTTCCCACCTTCACATTCTTCTCATCCAGAAATACATTTGGCAGCGTGCATTTCTCAACCCCCGGAAAGTGATGATATTCCCTGGGGACCAGATCCCTTTCAGGATATTCTTGATCTCTCTGCAAATGATTCCATCCAGAATGATCAGATGGAAAGTAGTTCTTGTTATATGTCTGATGACAACACCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATGTCAGTTGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAATGTACCAGATTCAAAACCAAAGGAGCCCGATGCCACCAAGCAGCAGCATGCACCATCTGGAGAAGTCAGTGCTCCTCCTACTTCAGCATCGAATGCGCTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTGGCGAGAAGGCTACTCCAAAGGGTGTTTTGAATCTAATGAAAATTGAGGCTCTTACTATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGCTTCTGAGAACAAATCGACAACCAAAGAAATGAAATCTTCAGACTTGAGAGCTAGCATGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTCCATGAACAACTTGAGGTTCAAAGGAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGTCTTCAGGTGATGTTTGAGAAACAAAGAGAGATGGAGGACAGCAAACACATGACATCATCATCCTCCTTGGACAGGCCCACGGTATTAACTTCCCACACAAGTGAGGGTCAAGAAACCTTAAATGAGGGTCAGGAAAAATCTGGAGTCAGCAATATCAATGCAAGAATCATGGACAAAGAATGTTCTGAGGATGCCTGCACAAGGCAAGAAGTGGAAGAAACTAAAGTTACTAATGAAGAAGAGGCGGGGTATGATCAGTTGGGTGCACCAGCCTCCAAACGGGTGAAAAGTAGATGA 1362 0.442 MSPSFPLLPTRIEDKYMKPADSFSSAARDLTANPASVQAFSSNSNLRSGGHMLSSPSKCLNDISFSSISQHDRQYQGSPFISKTLRRDDVMPWLGASLTQSGEDASFPPSHSSHPEIHLAACISQPPESDDIPWGPDPFQDILDLSANDSIQNDQMESSSCYMSDDNTKKTDFGEWVDQLMSVDESPHPNWSQLLVDDNVPDSKPKEPDATKQQHAPSGEVSAPPTSASNALQSKPRMRWTPELHEAFVEAVNKLGGGEKATPKGVLNLMKIEALTIYHVKSHLQKYRTARFKPESSGGASENKSTTKEMKSSDLRASMGITEALRLQMELQKRLHEQLEVQRKLQIQIENQGKRLQVMFEKQREMEDSKHMTSSSSLDRPTVLTSHTSEGQETLNEGQEKSGVSNINARIMDKECSEDACTRQEVEETKVTNEEEAGYDQLGAPASKRVKSR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4572 453 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 231 419 IPR044848 GO:0003700
Prci1g4572 453 MobiDBLite consensus disorder prediction 291 313 - -
Prci1g4572 453 MobiDBLite consensus disorder prediction 375 406 - -
Prci1g4572 453 MobiDBLite consensus disorder prediction 365 453 - -
Prci1g4572 453 Gene3D - 234 293 - -
Prci1g4572 453 FunFam Myb family transcription factor 234 292 - -
Prci1g4572 453 MobiDBLite consensus disorder prediction 187 234 - -
Prci1g4572 453 MobiDBLite consensus disorder prediction 412 435 - -
Prci1g4572 453 NCBIfam myb-like DNA-binding domain, SHAQKYF class 235 289 IPR006447 GO:0003677
Prci1g4572 453 Pfam MYB-CC type transfactor, LHEQLE motif 319 365 IPR025756 -
Prci1g4572 453 Pfam Myb-like DNA-binding domain 237 288 IPR001005 -
Prci1g4572 453 SUPERFAMILY Homeodomain-like 233 289 IPR009057 -
Prci1g4572 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 232 292 IPR017930 -
Prci1g4572 453 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4572 Prci-Chr1 59103479 59108240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4572 30 406 G2-like Transcription Factor Family AT3G04450 40.334 5.08e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci1g4572 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4572 - - pcin:129312811 895.96