Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4566 ATGCAGCCCCACTTGTTATTCCACTGTTTCATTGGCTTCTCTCTTGTTTTTGCTGAGGGAGCTCAATCTGCATTAATTAGTGATGAATTGTCAGCACTTCTCACATTCAAATCCAGTCTCGTTGATCCAATGAAGAATCTGAAGGATTGGCAAGCACCCACCAATCTGACCCGTAATGGTTCATGGTCAAGCCACTGTAGCTGGAGTGGGGTATTGTGCAACTCTAAAGGCTTCGTAGAGAGACTTGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCGGACCACATTCAGGCGCTTTCAAGTCTATCTTTTTTCAGCATAAGTTGCAACGATTTCGCTTCTTCATTGCCAAAATCACTGTCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCCACGGGACTTGGGAGTGCCACAGGATTGAGACTAGTTAACGCGTCAAATAATAATTTTTTGGGTTTTCTTCCTGAGGATCTTGGAAATGCAACGTTGCTCGAGAGCCTTGATTTTCGTGGGGGCTACTTCGAAGGTTCAATCCCCAGTAGTTTCAAGAATTTACAGAAGCTCAAATTTCTTGGGCTTTCAGGGAATAACTTTACAGGGAAGATTCCAGGAGAACTTGGAGAACTTGCTTCTCTAGAGACACTAATTCTTGGGTACAATGAGTTTGAAGGTGAGATCCCTTCAGAGTTTGGCAACCTCACCAATCTTCAGTATCTAGACTTGGCTGTGGGTAGTCTCAGTGGACAGATTCCACCACAATTGGGCAAGTTGAAAAAACTTCATACGCTTTTCTTGTACAAGAACAAGTTCGAAGGAAAGATTCCCCCTGAGATTGGCAACATTACGTCACTGGAATATCTGGACCTGTCGGATAATGAGATTTCAGGGAAGATCCCAGAGGAAATTGCTGAGGTGAACAACTTGCAGCTATTAAATGTAATGAGAAACAAACTAACAGGTTTTGTACCGGAAAAGCTTGGGGAGCTGAAGAATTTAAAAGTGCTTGAGCTATGGAAAAATTCTTTACTAGGTACTTTACCGGTGAACCTTGGACAGAACTCTCCACTGGAGTGGCTGGACGTGTCTTCTAACTCATTATCAGGCGAAATTCCTCCAGCCTTGTGTGCTTCTGCAAATCTCACTAAACTGATACTTTTCAATAATTCCTTCTCTGGTTCCATTCCAAGCGGGATTTCGACTTGTTCATCTTTGGCACGTGTTCGCATTCATAGCAATCTTATATCTGGGACTATTCCAGTTGGTTTCGGAAAACTACCAGACCTTCAAAGGCTGGAATTGGCCAAGAATAATCTCACCGGCCAAATTCCAATAGATATCGCTTCATCCACTTCACTTTCTTTCATCGATGTATCTTGGAACCACCTTGAATCATCTCTACCTTCTGGAATTCTCTCTATTCCCACCCTTCAAACCTTCATTGCGTCCAAAAACAGCCTGGGAGGCAATATTCCAGGCGAGTTCCAAGACTGCTTCTCTCTCTCTGTGCTGGATCTTTCAGACAACCTTATATCTGGAGACATCCCAGAAAGCATTGCTTCTTGCCAAAAACTAGTCCATTTGAATCTCGGTTACAACCAGTTAACTGGGGAAATACCGAAATCAATCGCCAACATGCCCACTTTAGCCACTCTTGATCTGTCCCACAATTCACTTTCAGGTCAGATAACCAAAAACCTTGGCAGCTCCCCCGCTCTTGAAACGATCAACCTATCCTACAACAAGCTTGAGGGTCCGGTGCCCTCAAATGGGATTTTGTTGACCATAAATCCTAACGATCTAACAAACAATGCCGGTCTCTGCGGAGGCATTCTTCCTCCATGTTCTCAGAGTTCAACTCCAGTAAGCCAGCGAAGGAGCTCACGCATGAAGCACGTCATGATTGGTTTTGTCACAGGAATATCATTAATTTTATCCCTGGGCATTGCATTTATTGGTGGCAGATGGTTATACAATCAATGGTACTTATACAACAGCTCTGTCCATGATTGGTTCAAAAATAGCAATGAAGAATGGCCTTGGAGATTAGTGGCATTCCAAAGGGTGAGCTTCACAACCAGTGAGATTCTCGGCTGCATTAAGGAACCAAACATTATAGGCATGGGAGGCACTGGGATTGTGTACAAAGCTGAAATTCCTAGACCTCATGTGACAGTGGCAGTGAAGAAATTATGGAGGCCAGGTGCAGACATAGAAGATGGGAATGACGTGTTGAAAGAAGTGAATCTGCTAGGGAGACTGAGGCATAGGAATATTGTAAGGCTGTTGGGGTATGTTCATAACGAAAGGAATGTGATGATGGTGTACGAGTTCATGCCCAATGGGAATCTGGAGACAGCGCTACATGGAGAGGAAGGAGGAAGAATACTGGTAGATTGGGTTGCAAGGTATAACGTAGCAGTTGGAGTTGCCCAAGGCCTCAATTACCTCCACCATGACTGTCACCCCCCTGTTATTCACAGAGACATCAAGTCTAACAACATACTCCTTGATGCAAATTTGGAGGCCAGGATAGCAGATTTTGGATTAGCAAAAATGCTGATCCATAAGAATGAGACTGTTTCGATGGTGGCCGGATCTTATGGTTATATCGCACCAGAATATGGGTATACTCTGAAAGTGGACGAGAAAACCGACATATACAGTTATGGTGTAGTGCTTCTGGAGATCATAACAGGAAAAAAGCCACTAGACCTGTCATTCGAAGAATGTGGAGACATAGTTGAATGGGTAAGAAAGAAGAGAAGCAATGGAGGGTTGGAAGAAGCACTAGATCCCACCATCGCGGGAAGGTGCAGGCATGTCCAAGAAGAGATGCTTCTCGTGCTCCGAATTGCACTTCTCTGTACGGCAAAGCTTCCAAAGGAAAGACCATCCATGAGGGACATAGTGACCATGCTTGGAGAGGCAAAACCCAGAAGAAAAAGCACTTGTCAAAATGGAATACACGACGAAACCAAGGAAACGCCAATCTTCACTACCTCTCCCATCATAAGCCTTCTCTAG 3057 0.4429 MQPHLLFHCFIGFSLVFAEGAQSALISDELSALLTFKSSLVDPMKNLKDWQAPTNLTRNGSWSSHCSWSGVLCNSKGFVERLDLSNMNLSGRVSDHIQALSSLSFFSISCNDFASSLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGSATGLRLVNASNNNFLGFLPEDLGNATLLESLDFRGGYFEGSIPSSFKNLQKLKFLGLSGNNFTGKIPGELGELASLETLILGYNEFEGEIPSEFGNLTNLQYLDLAVGSLSGQIPPQLGKLKKLHTLFLYKNKFEGKIPPEIGNITSLEYLDLSDNEISGKIPEEIAEVNNLQLLNVMRNKLTGFVPEKLGELKNLKVLELWKNSLLGTLPVNLGQNSPLEWLDVSSNSLSGEIPPALCASANLTKLILFNNSFSGSIPSGISTCSSLARVRIHSNLISGTIPVGFGKLPDLQRLELAKNNLTGQIPIDIASSTSLSFIDVSWNHLESSLPSGILSIPTLQTFIASKNSLGGNIPGEFQDCFSLSVLDLSDNLISGDIPESIASCQKLVHLNLGYNQLTGEIPKSIANMPTLATLDLSHNSLSGQITKNLGSSPALETINLSYNKLEGPVPSNGILLTINPNDLTNNAGLCGGILPPCSQSSTPVSQRRSSRMKHVMIGFVTGISLILSLGIAFIGGRWLYNQWYLYNSSVHDWFKNSNEEWPWRLVAFQRVSFTTSEILGCIKEPNIIGMGGTGIVYKAEIPRPHVTVAVKKLWRPGADIEDGNDVLKEVNLLGRLRHRNIVRLLGYVHNERNVMMVYEFMPNGNLETALHGEEGGRILVDWVARYNVAVGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKTDIYSYGVVLLEIITGKKPLDLSFEECGDIVEWVRKKRSNGGLEEALDPTIAGRCRHVQEEMLLVLRIALLCTAKLPKERPSMRDIVTMLGEAKPRRKSTCQNGIHDETKETPIFTTSPIISLL 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4566 1018 Gene3D Ribonuclease Inhibitor 317 629 IPR032675 -
Prci1g4566 1018 ProSiteProfiles Protein kinase domain profile. 710 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4566 1018 SMART serkin_6 710 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4566 1018 Pfam Leucine Rich repeat 293 308 IPR001611 GO:0005515
Prci1g4566 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Prci1g4566 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 629 - -
Prci1g4566 1018 PRINTS Leucine-rich repeat signature 556 569 - -
Prci1g4566 1018 PRINTS Leucine-rich repeat signature 295 308 - -
Prci1g4566 1018 SUPERFAMILY L domain-like 61 311 - -
Prci1g4566 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 184 284 - -
Prci1g4566 1018 Gene3D Ribonuclease Inhibitor 188 254 IPR032675 -
Prci1g4566 1018 ProSiteProfiles Leucine-rich repeat profile. 510 532 IPR001611 GO:0005515
Prci1g4566 1018 SUPERFAMILY Protein kinase-like (PK-like) 697 984 IPR011009 -
Prci1g4566 1018 Pfam Leucine rich repeat N-terminal domain 27 74 IPR013210 -
Prci1g4566 1018 Gene3D Phosphorylase Kinase; domain 1 710 792 - -
Prci1g4566 1018 ProSiteProfiles Leucine-rich repeat profile. 294 316 IPR001611 GO:0005515
Prci1g4566 1018 FunFam MDIS1-interacting receptor like kinase 1 710 792 - -
Prci1g4566 1018 PANTHER RECEPTOR-LIKE PROTEIN 55 437 985 - -
Prci1g4566 1018 ProSitePatterns Protein kinases ATP-binding region signature. 716 740 IPR017441 GO:0005524
Prci1g4566 1018 SUPERFAMILY RNI-like 257 603 - -
Prci1g4566 1018 Pfam Protein kinase domain 714 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4566 1018 Gene3D Transferase(Phosphotransferase) domain 1 793 1008 - -
Prci1g4566 1018 Gene3D Ribonuclease Inhibitor 255 316 IPR032675 -
Prci1g4566 1018 FunFam Leucine-rich repeat receptor protein kinase EMS1 285 367 - -
Prci1g4566 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 183 - -
Prci1g4566 1018 FunFam MDIS1-interacting receptor like kinase 1 793 1002 - -
Prci1g4566 1018 Gene3D Ribonuclease Inhibitor 26 187 IPR032675 -
Prci1g4566 1018 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Prci1g4566 1018 Pfam Leucine rich repeat 414 473 IPR001611 GO:0005515
Prci1g4566 1018 Pfam Leucine rich repeat 175 232 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4566 Prci-Chr1 59038318 59042204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4566 3 1018 Receptor kinase-like Gene Family AT1G08590 63.830 0.0 1276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci1g4566 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4566 - - gmx:100793873 1580.46