Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4525 ATGGATAGAGTGTTTTCCGTGGAGGACATTTCTGAACAGTTTTGGTCGCCTCCGGTACCCGCCGTAAAGGATGAATACTCCTCTGGAATGAATCGCAGTGCTTCCGAGTGGGCTTTCCAACGATTTCTCCAGGAAGCTTCTGCAGCTTCCGACGCTTCTCACCCTTTTGCTTCATCCAATCCTGACAAAAACGAAGACCGTGGACATAAAATCGAGGGAAAGCACAAACCCAAACAGGACCTCACCGCGCCATCCATTCCCAAGAATGCTGGTGTCTTCTCCAATGCACCTTCTCCAAGCATTCCTGCTGATTCCGAGCATTACCAAGCTATTCTCAAGAGCAAACTCAATCTCGCTTGTGCAGCCGTCGCCTTGACTCGGGGTTCTTTAGCCAAATCCCAAGATCCAGCCACTTTACCTAATGGCGTATCTAAGGCTAACAAAACTCCTCAAGACGGATCTCCTGCTACATTAGAAGGACATGGTCCATCTAACATACATGATAAAGATGCGAAAGGACCAGTTGGAATTCCTTCATTACCTGCCGTTCAAAAGAAATTGGCAGTTGCAACCAAGCCAACAACCAGTGGATCATCGAGGGATCAGTCTGATGATGAGGAAGCTGAAGGAGAGATTGATATGACTGAAAATATGGATCCTGCAGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGAGAGTCAGCCAGACGCTCGAGAAGAAGAAAGCAGGCTCATTTAACAGAGCTTGAAACACAGGTTGCTCAATTAAAAGCAGAAAATTCATCATTGTTAAATCGTCTTGCTGATGTCAGCCAGAAGTACAATGAAGCTGCTGTTGACAACAGAGTCTTAAAAGCTGACGTCGAAACATTAAGAGCAAAGGTGAAGATGGCCGAAGAGACTGTCAAAAGAATAACTGGGTTAAACCCAATGTTCAATGCCATGTCTGAGATATCATCGATGGGCATGCCATTATTTGATGGTAGCGCCTCTGACGCATCAGATGCAGCTGTACCTGTGCAAGATGACCCAAATCATAACTTCTATCAACGCACTTCGATCAATTCTTTGTCTGGGCCTGATATAAAGGTCAACAATGGACTGATAGATATATCTTCCATAGAAAATGTGCAGCAGAACCCCACGGCAATGGGAAATGGAAACAAGAAGGGGCGAACAGCTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGTATCCGTGGTGATGCAGATTCTTGTAGTCCGCCCAGCAATGGGGAGCAGTAA 1278 0.4624 MDRVFSVEDISEQFWSPPVPAVKDEYSSGMNRSASEWAFQRFLQEASAASDASHPFASSNPDKNEDRGHKIEGKHKPKQDLTAPSIPKNAGVFSNAPSPSIPADSEHYQAILKSKLNLACAAVALTRGSLAKSQDPATLPNGVSKANKTPQDGSPATLEGHGPSNIHDKDAKGPVGIPSLPAVQKKLAVATKPTTSGSSRDQSDDEEAEGEIDMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLKAENSSLLNRLADVSQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEISSMGMPLFDGSASDASDAAVPVQDDPNHNFYQRTSINSLSGPDIKVNNGLIDISSIENVQQNPTAMGNGNKKGRTASLQRVASLEHLQKRIRGDADSCSPPSNGEQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4525 425 Coils Coil 282 302 - -
Prci1g4525 425 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Prci1g4525 425 Gene3D - 223 280 - -
Prci1g4525 425 FunFam BZIP transcription factor 222 273 - -
Prci1g4525 425 Coils Coil 233 274 - -
Prci1g4525 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 227 242 IPR004827 GO:0003700|GO:0006355
Prci1g4525 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 277 IPR004827 GO:0003700|GO:0006355
Prci1g4525 425 MobiDBLite consensus disorder prediction 129 224 - -
Prci1g4525 425 Pfam bZIP transcription factor 223 275 IPR004827 GO:0003700|GO:0006355
Prci1g4525 425 SUPERFAMILY Leucine zipper domain 224 274 IPR046347 GO:0003700|GO:0006355
Prci1g4525 425 CDD bZIP_plant_GBF1 225 276 IPR045314 GO:0003700|GO:0006355
Prci1g4525 425 MobiDBLite consensus disorder prediction 131 154 - -
Prci1g4525 425 PANTHER BASIC LEUCINE ZIPPER 63 1 413 - -
Prci1g4525 425 MobiDBLite consensus disorder prediction 60 81 - -
Prci1g4525 425 Pfam Basic leucine-zipper C terminal 291 414 IPR020983 -
Prci1g4525 425 MobiDBLite consensus disorder prediction 49 103 - -
Prci1g4525 425 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4525 Prci-Chr1 58746877 58750592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4525 1 313 bZIP Transcription Factor Family AT4G02640 40.000 1.98e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g4525 bZIP_C 6.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4525 K25784 - qsa:O6P43_011210 503.827