Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4518 ATGGGGAAGGCGAGCGAGTGGATCAGAAACTTGCTGGTAGGAAAGAAGCAAGAGAAATACAAGCAGATCGGACAGAAGGGCGACGGTGAGACGGAGAGCCACAGCCCCAGAGTGAAGCGCCGATGGAGCTTCGGAAGAAAATCGGTCAAGGTAACAGAGCATAGATTGTCCGCCTCTTTCGATTTAACTGACTCCGCTAAGCTCCGAATACGGGAGATCCTCCAAGCTCAACCTCGCAGATCTTCTGACATCCAAAACGCCGCCGCTACTAAGATTCAAGCTGCTTTTCGCGCATATTTGGGAAGAAGAGCATTGCATGCTCTGAGGGGACTAGTCAAGTTGCAGGCATTAGTGAGAGGGCACCTTGTAAGGAAGCAGACAACCAACGCACTGCGCGGCATGCATGCCTTGATGACCATTCAAGTCAGAGCCCGAATCCTCCGAATCCTGATGGCTCAACAATCAAGCCTTCTAGAGAAGCAGCCTTCACAGCTTAGAGTAATGCCTCTCCCCACAAGTTACGTGCAAGATTATGAAGAATCAAAGCATACGAATCTGAGAGAAACGTTAGGAGTTTTAAAAACCAGAAGTGCCCGTCTAGACGGTCCACCTCGTAAGAGCACAGAGCATGATTCCGGGACGTTGATTTCAAAGCATCTTTCGGATCTTTCGGTTTGGAAGCGACTCCATCAATACTCAGCACCAAACAGCCCTGCGGACTGCATGACCATGTCTGGATTAACTCCAACGGAGGGCTTGTCCACTTCTCTGCGTCATCACCAATCGTATTCACGCGAACCGAATTACATGACAAGAACAGTGTCATCAAGGGCCAAAGCTCGGTCTGAGAGTGAGCCAAAACAATGA 867 0.4983 MGKASEWIRNLLVGKKQEKYKQIGQKGDGETESHSPRVKRRWSFGRKSVKVTEHRLSASFDLTDSAKLRIREILQAQPRRSSDIQNAAATKIQAAFRAYLGRRALHALRGLVKLQALVRGHLVRKQTTNALRGMHALMTIQVRARILRILMAQQSSLLEKQPSQLRVMPLPTSYVQDYEESKHTNLRETLGVLKTRSARLDGPPRKSTEHDSGTLISKHLSDLSVWKRLHQYSAPNSPADCMTMSGLTPTEGLSTSLRHHQSYSREPNYMTRTVSSRAKARSESEPKQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4518 288 Gene3D - 82 138 - -
Prci1g4518 288 PANTHER IQ-DOMAIN 5-RELATED 1 287 - -
Prci1g4518 288 MobiDBLite consensus disorder prediction 18 38 - -
Prci1g4518 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 127 IPR027417 -
Prci1g4518 288 ProSiteProfiles IQ motif profile. 85 113 IPR000048 GO:0005515
Prci1g4518 288 MobiDBLite consensus disorder prediction 250 288 - -
Prci1g4518 288 MobiDBLite consensus disorder prediction 250 277 - -
Prci1g4518 288 SMART iq_5 84 106 IPR000048 GO:0005515
Prci1g4518 288 SMART iq_5 107 128 IPR000048 GO:0005515
Prci1g4518 288 Pfam Protein of unknown function (DUF4005) 238 288 IPR025064 -
Prci1g4518 288 ProSiteProfiles IQ motif profile. 109 136 IPR000048 GO:0005515
Prci1g4518 288 Pfam IQ calmodulin-binding motif 87 105 IPR000048 GO:0005515
Prci1g4518 288 Pfam IQ calmodulin-binding motif 112 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4518 Prci-Chr1 58657105 58659119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4518 1 288 IQD Protein Family AT4G14750 34.416 8.82e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4518 - - pcin:129285968 554.288