Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4513 ATGTTCGATGGAGTCCCGGACCAGTTCCATCAGTTCATAGCACCCGGAACTTCATCGCTTCCGCTTCACTTGTCTTTCCCTCTCAATGCCTCTCTAACACCCAACACTAACACCTTCCCTACCTTCGATCCTTTTCACTTGCCTCTCCAGCAACCCAATCTCTTGCACTCCCTGCACCACCTGCCTCCTCCTCCTGCCCACAAGCACCAGCAAGACAAGCAAGATGATAGCATGAGCAGAGTGTCCATGAACCTGGAGATTGAAAGAGAGAGGCAATTACCTGAGCTCATCGATTCCTGCTGGACTCACGATGAAGTGCTCGCGTTGTTCAGGATCAGATCTAGCATAAAAACCTGTCTCCCAGACCTCACCTGGGAACATGTCTCCAGGAAGCTAGCAGAGCTTGGATTTAAGAGGAGTGCGGAGAAATGCAGGGATAAGTTTGAGGAGGAAAGTAGATACTTGAACCACATTAATTACAACGAAAATTATCGGTTCATTTGTGAGTTCGAACAAGAGCTTTATCATCAAGACCCTGAAGCTCTGGTTGGGACGGAAGAAAAGTCGACCCAGCAGCTGCAAAAGCCAAGGGAGGGACAAGACAAGACGTCGGGCCACGCATTGGAAGAGAGTTCTACAGGACATGACACATCAGCACCCACCATTACCAAACGCTGCGTGGTGGAAAAATCAAAGCACAGAAAGCGAAAGAAGCAAGATGGTAAGTTTGAGATGTTCAAGGGCTTCTGTGAGAATATTGTCAGCAGGATGATGGCTCAACAAGAGGAGATGCACAATAAGCTTCTCGAAGACATGCTCAGGAGAGACGAGGAGAAGTTTGCGAGAGAGGAGGCTTGGAAGAAGCAAGAGTTGGATAGGATGAATAAGGAGCTCGAAATGATGGCACACGAGCAAGCTCTGGCGGGAAACCGGCAGGCCACCGTAATAGAATTCTTGAAGAAATTCACTGCAAGCTCTCCCAGAGTAACGAGCGTTTCAGATCCGAAAACATCGCATTCACAAAATCTTCACTTTTCTGTTGAGATCAGTAAGGAGAACGATCCAGAGACCCCACCTTCTTCTACAATGACACCGCCAAATCATCAAGATATAATAACAGCTTCTGCAGCCTTACCCATCACGTGCCCTAGTGCAGTAGCGGCAGTAGCAAAAAACCCTAGCTCAAGTCAGGCCCAGGAGACATCAGAAGTTGCACAGAACCCTAGTTGTGTTGATTCAGTCTCAACGTGCAAGGCGTCGTCGACGGGATTGTCGAGCGAGAAAGGAGACGTGGGGAGGAGATGGCCGAGGGATGAAGTGTTGGCATTAATAAACCTGAGGTGCAGCCTGAATAACAACAGCGAAGACAAAGAGGGAAACAAGGCTCCACTGTGGGAGAGAATCTCGCAAGGGATGTCAGATTTGGGATACAGGAGAAGTGCAAAGAGGTGCAAAGAAAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATATTAACAAGAAGAGAACGCGCGACTCCAGGACTTGTCCTTATTTCCACCTCCTCGCCACTTTGTATTCTCAAGGAAAGCTTGTTCCTGATCAATCTGAATTATTAAGGCCAGCGAGCCAAATGGTTTCACCTCCGAGTCCCCCTCAAATCCCACCACAGCCCCAAGCTCAACCTTCCCACCAAGTTATTCACGTCGATGAAGGTGAGAATACTGCGATGCAGTGCACCTGA 1731 0.4835 MFDGVPDQFHQFIAPGTSSLPLHLSFPLNASLTPNTNTFPTFDPFHLPLQQPNLLHSLHHLPPPPAHKHQQDKQDDSMSRVSMNLEIERERQLPELIDSCWTHDEVLALFRIRSSIKTCLPDLTWEHVSRKLAELGFKRSAEKCRDKFEEESRYLNHINYNENYRFICEFEQELYHQDPEALVGTEEKSTQQLQKPREGQDKTSGHALEESSTGHDTSAPTITKRCVVEKSKHRKRKKQDGKFEMFKGFCENIVSRMMAQQEEMHNKLLEDMLRRDEEKFAREEAWKKQELDRMNKELEMMAHEQALAGNRQATVIEFLKKFTASSPRVTSVSDPKTSHSQNLHFSVEISKENDPETPPSSTMTPPNHQDIITASAALPITCPSAVAAVAKNPSSSQAQETSEVAQNPSCVDSVSTCKASSTGLSSEKGDVGRRWPRDEVLALINLRCSLNNNSEDKEGNKAPLWERISQGMSDLGYRRSAKRCKEKWENINKYFRKTKDINKKRTRDSRTCPYFHLLATLYSQGKLVPDQSELLRPASQMVSPPSPPQIPPQPQAQPSHQVIHVDEGENTAMQCT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4513 576 MobiDBLite consensus disorder prediction 56 79 - -
Prci1g4513 576 ProSiteProfiles Myb-like domain profile. 93 152 IPR001005 -
Prci1g4513 576 Coils Coil 259 279 - -
Prci1g4513 576 CDD GT1 433 499 - -
Prci1g4513 576 MobiDBLite consensus disorder prediction 393 427 - -
Prci1g4513 576 Pfam Myb/SANT-like DNA-binding domain 99 159 IPR044822 -
Prci1g4513 576 Pfam Myb/SANT-like DNA-binding domain 433 519 IPR044822 -
Prci1g4513 576 PANTHER FI21293P1 63 566 - -
Prci1g4513 576 MobiDBLite consensus disorder prediction 183 221 - -
Prci1g4513 576 FunFam Trihelix transcription factor GT-2 435 497 - -
Prci1g4513 576 MobiDBLite consensus disorder prediction 191 209 - -
Prci1g4513 576 ProSiteProfiles Myb-like domain profile. 434 492 IPR001005 -
Prci1g4513 576 MobiDBLite consensus disorder prediction 541 555 - -
Prci1g4513 576 MobiDBLite consensus disorder prediction 538 560 - -
Prci1g4513 576 MobiDBLite consensus disorder prediction 393 431 - -
Prci1g4513 576 Gene3D - 101 156 - -
Prci1g4513 576 Gene3D - 435 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4513 Prci-Chr1 58640529 58643156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4513 243 524 Trihelix Transcription Factor Family AT5G28300 46.575 3.32e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g4513 Myb_DNA-bind_4 7.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4513 - - qlo:115981744 518.464