Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4503 ATGAACGGGGTCGCACACTTCGAACCGGATTACTCTGAGTTCGTCGAAGTTGATCCTACCGGCAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCAAAGATAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCATGGAACCAAGTCAAGCTGTATGATTTCCTGCAAAGCCCTGAAGACCTTGAGAGGCTCTACTGTGAAATTCATCTTCTCAAAACCCTGAAGCACAAAAACATAATGAAATTTTACACTTCTTGGGTTGATACTGCCAACAGAAATATCAACTTCGTCACTGAAATGTTTACTTCTGGTACTCTCAGACAGTATAGGCTAAAGCACAGGAGAGTAAACATCAGAGCAGTGAAGGATTGGTGTCGACAGATATTGAGAGGACTTCTGTATCTTCATAGCCACGATCCACCTGTGATCCACAGAGATCTCAAATGCGATAACATTTTTATTAATGGAAACCAAGGGGAAGTAAAGATTGGGGATCTTGGCTTGGCAGCAATTCTAAAAAAATCCCATGCTGCTCATTGCGTCGGAACACCTGAGTTTATGGCCCCTGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGAATGTGCATATTAGAGATGGTCACATTTGAATATCCTTATAGCGAATGCACTCATCCAGCTCAGATCTACAAGAAAGTTATATCTGGGAAAAAGCCTGATGCTTTGTATAAAGTTAAAGATCCAGAAGTGCGACAATTTGTTGAGAAATGCTTGGCAACAGTGTCTTTAAGGCTCTCAGCAAGGGAGCTTCTCGATGACCCGTTTCTCCAAATTGATGATGATTGTTATAATTTGACACTAGTAGACAGTGGAGAATTTGATGACTTCGGTCCTTTTGTCCGGCATCCATTCTTTGATCTTCACCGAAGTTATAGTAACTTAAGCAGTGAATACTCAAATTATTATGGATATGAAGCTCCAGGATACTGGTATTCTCATCCAGTTGACACTGAACCAAGTGGAATCGAACTTTTTGAACACCGTGATGGTGACCCATCTGAAGATGTTGACGTAAGCATCAAAGGCAAGAGGAAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCGGATAAAGAAGGTCGTATCCGAAATATTTATTTCCCATTTGACGTAGAGATGGACACAGCACTTAGTGTGGCAACTGAAATGGTTGCAGAACTTGATATTACCGATCAAGATGTGACCAGAATATCAGATATGATAGACGGGGAAATTGCTTCCTTGGTGCCTGAATGGAGGCCAGGACCAGGATTTGAAGAAACTCCTCGCTTCACAGAACAAAAGTTCTGTCAAAATTGTGTATCGAATCATACATCAACTGGCTCCTTTATGGATTTTCTGCCACATAAGTCTGGTGCCAAGAACTCGCAACTTCTTCCATGCTGTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTATGTTCCAGTCTGAGTATGAAGATCATGCTAGAGAGGATGCTTCAAACACATCAACCCAACCAGACTGCTTGCAGTGTCAGGAGTTGTGGAAACAACAGGAAAGTTGCGAGATCACTCCTGTAGATTCTGAACTTAGCCATTCTGATGAACAAAATGAACCAATAGATAAACAAGCACCAGCAGAAGATAAGGGACAGGGTTTTAGGGAAAACAAAATTGCATCCAACTCAAGAAATTGTCTATCTACTCTATCAGGATTCCATTACTCATCTACAATTCGTTCACTGTATCTTGACCTCGAGGACAAGTGTGGGAAAGAGATCGAACAGGAACTTAGATGGCTCAGAGCAACGTATCAAATCGAGTTAAGGGAACTTAGGGACCGACAGTTAGGGATGACGAAGTCCTCACAAACTAGTGACAGAAATGACAACAAAGAATATGGCATGATGTCATTGTCCCTCTCACCGAGAGACGCATTAAACAGAGGCAACCATGGGATTCATACGAAATCCTTCACTAATAATGGGAGTTGTGGTTCTAGTTGCCATTCTCTTGTCAATAGGAGCCGCCCCAACTCGGACACCCAAAGGGCCCGAACTTGTGAGGCGATGGGTTTCCACGGAGAAGGTATGGTTTGTACAAAGAGTTTGGATGAAGGGTCGTTGCTTCCACTCTATGTACGCAGGACAGTTTCCCTCCCAGTCGATGCTGTTGATATATAA 2232 0.4234 MNGVAHFEPDYSEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKDWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILKKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDDCYNLTLVDSGEFDDFGPFVRHPFFDLHRSYSNLSSEYSNYYGYEAPGYWYSHPVDTEPSGIELFEHRDGDPSEDVDVSIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDVEMDTALSVATEMVAELDITDQDVTRISDMIDGEIASLVPEWRPGPGFEETPRFTEQKFCQNCVSNHTSTGSFMDFLPHKSGAKNSQLLPCCRHGCASMHGRFEEIMFQSEYEDHAREDASNTSTQPDCLQCQELWKQQESCEITPVDSELSHSDEQNEPIDKQAPAEDKGQGFRENKIASNSRNCLSTLSGFHYSSTIRSLYLDLEDKCGKEIEQELRWLRATYQIELRELRDRQLGMTKSSQTSDRNDNKEYGMMSLSLSPRDALNRGNHGIHTKSFTNNGSCGSSCHSLVNRSRPNSDTQRARTCEAMGFHGEGMVCTKSLDEGSLLPLYVRRTVSLPVDAVDI 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4503 743 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Prci1g4503 743 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Prci1g4503 743 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Prci1g4503 743 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Prci1g4503 743 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 644 - -
Prci1g4503 743 MobiDBLite consensus disorder prediction 542 569 - -
Prci1g4503 743 CDD STKc_WNK 22 281 - -
Prci1g4503 743 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 429 IPR024678 GO:0004674|GO:0005524
Prci1g4503 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci1g4503 743 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4503 743 Gene3D - 373 440 - -
Prci1g4503 743 MobiDBLite consensus disorder prediction 545 569 - -
Prci1g4503 743 Gene3D Transferase(Phosphotransferase) domain 1 107 287 - -
Prci1g4503 743 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4503 743 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4503 Prci-Chr1 58593060 58596632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4503 1 517 MAP Kinase Kinase Kinase AT3G22420 56.684 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci1g4503 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4503 K08867 - gmx:100775959 1124