Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4500 ATGGCATCCGATCAGCACGACACCGTTTTCCCCGAAGAGGACCTTGACGACGACGACGACGAATCTCAAGAGGACGAGGACGACGACGACGACGACGACGTTCTTGGTGAACCCGACGACGACGAAGATCGCGAAGCTTCTCCTTCCACCTCTTCTGCCCTCGCCGTTACCGTCCCCGACCCTTCCGCCACCGTCACTGTCGCCGTCCCCGGCTCTGCTACCTCCAACGGCGCTGCTGCCCCAATTTCCACGATTGCCGCTACCACAATTGTCGTCCCTGATACCGTCGATCGCAAGCGTCCGCGGATTGACTCCGGCGAAGAGAAAAAGCCTCTGGACGATTCACGCAGACTGTTTCAACGTCTTTGGACCGATGAGGACGAGATCGAGCTCTTGCAGGGCTTCCTTGACTACACCACTCAGCGAGGATCCTCCCACCATAACGACACCGCTTTGTTTTACGATCAAATCAAGTCCAAGCTTCAGCTCGAGTTCAACAAAAACCAGCTTGTCGAGAAGCTCCGGAGGTTGAAGAAGAAATACCGCAATGTTTTGAATAAGATTAGTGCCGGCAAAGAATTGTCCTTTAAGAGCCCCCACGATCAAGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCAATTTGGGTTCGACCGGCGCTGCGGCCGAAGATACCGCTCTGGATGACGACGAAATCAGCCCCAATCCTAACCCTAACCCTAACCCTAATTTTAGCCACTCACAGCCCAAGAATGAGGTAATAATTGGGATTCCTGAAGAGAAGAGAACGCCGTCGTCCCGGAAACGTTCGCGGTCTCGATCCGGGATCAGAACGGATGAGAAGCGCGACTTGAATGATGGATTGGCGTCAAACAAAGATAATTATTGTATTAGTAATAGTAATGCTAATACTAATAATAATCATAACAATAACCATAACATACCAGGCTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCGCCCTTGTTCAAGGAGATAGTGAGTAATGCCATGGGTGGCCCATTCGGGGCTAGGGGGTTTGGAGGATTGACATTAAATCCTATGCCATTGAGCTTCGGTGTGCCATCTTTGATGAATTGCGGCGGCGGAGAAACGGTAGATGACAAGTGGAGGAAGCAACAGATTCTGGAGTTGGAGGTGTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGGCTGCGCTGGAGGAGTTGCGATCCGCTGGACGATGA 1236 0.5178 MASDQHDTVFPEEDLDDDDDESQEDEDDDDDDDVLGEPDDDEDREASPSTSSALAVTVPDPSATVTVAVPGSATSNGAAAPISTIAATTIVVPDTVDRKRPRIDSGEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVLNKISAGKELSFKSPHDQATFEISRKIWSNLGSTGAAAEDTALDDDEISPNPNPNPNPNFSHSQPKNEVIIGIPEEKRTPSSRKRSRSRSGIRTDEKRDLNDGLASNKDNYCISNSNANTNNNHNNNHNIPGLIEETVRSCLSPLFKEIVSNAMGGPFGARGFGGLTLNPMPLSFGVPSLMNCGGGETVDDKWRKQQILELEVYSKRLELVQDQIKAALEELRSAGR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4500 411 MobiDBLite consensus disorder prediction 255 288 - -
Prci1g4500 411 Coils Coil 385 405 - -
Prci1g4500 411 MobiDBLite consensus disorder prediction 10 44 - -
Prci1g4500 411 Coils Coil 160 187 - -
Prci1g4500 411 PANTHER BNAANNG10740D PROTEIN-RELATED 6 405 IPR007592 GO:0006355
Prci1g4500 411 MobiDBLite consensus disorder prediction 227 291 - -
Prci1g4500 411 MobiDBLite consensus disorder prediction 1 62 - -
Prci1g4500 411 Pfam Protein of unknown function, DUF573 119 213 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4500 Prci-Chr1 58582674 58584506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4500 1 408 GeBP Transcription Factor Family AT5G28040 46.413 5.95e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Prci1g4500 DUF573 1e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4500 - - pcin:129289843 712.99