Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4489 ATGAAGAACATTTTCAAGAAGCTTCACAAAGCGAGCAACCACGACCCTAATCGATCCAATGAAACCCCGGCTTCCGTCGCATCAGCTTCTGATGCCTCTGATCACCGTCCTGCACCCCTTCAAAACTCTGCCCCTTCTCCGGCCAGTCCCTCTTCATTGTCTCCCTCTTCGGCAGCGGCCGGTGCTTCCCAACCCCCGCCTGCTACGCCCAATCGGCAAGACTATTTTTTGTCAGAGGAGGAGTATCAGGTGCAGCTTGCCCTGGCCATCAGTGCTTCCAAGTCTGATTTTCGGGACGATCCTGAGAAGGATCAGATCCGAGCGGCCACGCTGCTGAGCCTGGGAGGCCATCGAATTGATTCAGCAATGAATCGTGATGATGTGGCGAAGGCGCTGTCCAGACAGTACTGGGAATACAACGTGCTTGACTATGAAGAGAAAGTAGTTGATGGTTTTTATGATGTATATGGTCTTTGTACTGATTCATCGATGCAAGGAAAGATGCCCTCTTTGGAAGACCTTGAAGCAAATCCGGGTAATTCAAGTTTTGAAGTTGTCATAGTGAATCAAGCAATTGATCCTGCCCTGGAAGAGTTAGTGCAAATCGCACAATGTGTAGCACTAGATTGTCCTGTCACTGATGTTGGTGTTTTGGTGCAAAGACTGGCTGAACTTGTTACAGGGCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGCTACGGACATCTCTTCAGACAAGTATGTTACCTATAGGGTCTATAAATATTGGCCTATCCAGGCACCGTGCTCTGCTTTTTAAGGTATTGTCTGACAATATCAAGATGCCCTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGTACTCTTATTCCAACTGATATTTTTAATCCTAAAGACCCTTCCTTTAAGCCATACAATCCCAAGAATTTTCCAGCCTTACAGTCAACAAATGAAAATAGATTTTCTTACCCAAGACCTTTGTCATCTGATGGTGAAGGCAGTAGTCAAAGTTCTGCGATCAGAAGTGATTCATCATCATTGAATGTGAGACCATATTTTGGGAAGTCTGATTATATGTCTTCAAACCTGAGTTTGGGTGGAGAAACTGGTGTTGGTCCTTCCAAAGTTCCTAGTAAAGCATCTTCTAGCCAAGCAGACAATTTTTTTCCATCAGCCAGTAGTTCTCTGTACAAAGGAACTCGTGGAATGAATGCTATTGGTGATGGGACTAGACTGAACATCAATGTTGTACCATATGGTCAGAATGGTCCAGATGACTCTAGGAACCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACGGGCAAGACTGCTGTACACAACAAACCCGTGGAAAATCAAGCTCCTGAACTTCATAGTACGAAAGAAAACAAATTTTCTGGTCGACCCCCGGTACCTTTGATGTGGAAGAACCGTTATGCATACAATGAAGATCCCAGGAAACTTAACCGTAATCCTAATGAATATAACCCTTCTTCGTTAGCTTCCAATAGTTCTTCTGTATCGGAAAAAGTTGATGTCAATAATTCCAACTCATCATACCATGCAAATATCAATAGAGACAAAGAGAGGAGCTTGATGCAAGTTACTGGCACAGTATCAGCATCTGGTTCTGGTGATCTGAACAGGGATGAAGGTTTCAATGCTGAATGGAACAAAGGGAATGTGGAAAAATCTCAAAACAGCATAGCAGATGTTGTCAAAGAACAGGAAAACAATGAAATTGGATTTCATGACCGAAGAAAAAGCACTCATGACAGATTCATGGGTAGCAAGTTGAAACTAAAGGAGCTAGAGAGTCCTAGTTCATCAGTTGATTCCATCACAAATAGGGTTGACCAAATCTTGGATGATGTAGATGTGGGCGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATATCAAGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAGTTTTTGGATCAGGATTTTTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCTAATGTTGTTCTTTTTATGGGTGCTGTTACTCGACCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCTAGGGGAAGTTTGTACCGAATTCTTCATCGTCCTAATTGTCAAATTGATGAAAAACGCAGAATTAAAATGGCTCTGGACGTGGCAAGAGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGTGATCTGAAGTCACCAAATCTCTTGGTTGATAAGAACTGGAATGTTAAGGTTTGTGATTTTGGGTTGTCGCGACTGAAGCATAACACATTTTTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGGAATGAGCCCTCAAATGAGAACCAGTCAATTGCGTTCCCGTGGCGTACTTTTCTGATGCTAATTAGGTCCTGTTAG 2616 0.4323 MKNIFKKLHKASNHDPNRSNETPASVASASDASDHRPAPLQNSAPSPASPSSLSPSSAAAGASQPPPATPNRQDYFLSEEEYQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGHRIDSAMNRDDVAKALSRQYWEYNVLDYEEKVVDGFYDVYGLCTDSSMQGKMPSLEDLEANPGNSSFEVVIVNQAIDPALEELVQIAQCVALDCPVTDVGVLVQRLAELVTGHMGGPVKDANIILARWTERSTELRTSLQTSMLPIGSINIGLSRHRALLFKVLSDNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDIFNPKDPSFKPYNPKNFPALQSTNENRFSYPRPLSSDGEGSSQSSAIRSDSSSLNVRPYFGKSDYMSSNLSLGGETGVGPSKVPSKASSSQADNFFPSASSSLYKGTRGMNAIGDGTRLNINVVPYGQNGPDDSRNLFADLNPFQIKGTGKTAVHNKPVENQAPELHSTKENKFSGRPPVPLMWKNRYAYNEDPRKLNRNPNEYNPSSLASNSSSVSEKVDVNNSNSSYHANINRDKERSLMQVTGTVSASGSGDLNRDEGFNAEWNKGNVEKSQNSIADVVKEQENNEIGFHDRRKSTHDRFMGSKLKLKELESPSSSVDSITNRVDQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYQADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNENQSIAFPWRTFLMLIRSC 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4489 871 MobiDBLite consensus disorder prediction 490 510 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 342 380 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 1 73 - -
Prci1g4489 871 Pfam Protein tyrosine and serine/threonine kinase 677 849 IPR001245 GO:0004672|GO:0006468
Prci1g4489 871 SUPERFAMILY Protein kinase-like (PK-like) 666 849 IPR011009 -
Prci1g4489 871 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 412 431 - -
Prci1g4489 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Prci1g4489 871 FunFam Serine/threonine-protein kinase isoform 1 667 754 - -
Prci1g4489 871 CDD STKc_MAP3K-like 682 853 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 523 560 - -
Prci1g4489 871 SMART serkin_6 676 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4489 871 MobiDBLite consensus disorder prediction 530 560 - -
Prci1g4489 871 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 76 850 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 345 380 - -
Prci1g4489 871 ProSiteProfiles Protein kinase domain profile. 676 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4489 871 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Prci1g4489 871 MobiDBLite consensus disorder prediction 406 431 - -
Prci1g4489 871 Gene3D Transferase(Phosphotransferase) domain 1 755 857 - -
Prci1g4489 871 MobiDBLite consensus disorder prediction 17 71 - -
Prci1g4489 871 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4489 Prci-Chr1 58498075 58505184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4489 1 862 MAP Kinase Kinase Kinase AT1G08720 54.675 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g4489 EDR1 3.2e-77 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4489 - - aprc:113870732 1224.92