Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4488 ATGAAGAACATTTTCAAGAAGCTTCACAAAGCGAGCAACCACGACCCTAATCGATCCAATGAAACCCCGGCTTCCGTCGCATCAGCTTCTGATGCCTCTGATCACCGTCCTGCACCCCTTCAAAACTCTGCCCCTTCTCCGGCCAGTCCCTCTTCATTGTCTCCCTCTTCGGCAGCGGCCGGTGCTTCCCAACCCCCGCCTGCTACGCCCAATCGGCAAGACTATTTTTTGTCAGAGGAGGAGTATCAGGTGCAGCTTGCCCTGGCCATCAGTGCTTCCAAGTCTGATTTTCGGGACGATCCTGAGAAGGATCAGATCCGAGCGGCCACGCTGCTGAGCCTGGGAGGCCATCGAATTGATTCAGCAATGAATCGTGATGATGTGGCGAAGGCGCTGTCCAGACAGTACTGGGAATACAACGTGCTTGACTATGAAGAGAAAGTAGTTGATGGTTTTTATGATGTATATGGTCTTTGTACTGATTCATCGATGCAAGGAAAGATGCCCTCTTTGGAAGACCTTGAAGCAAATCCGGGTAATTCAAGTTTTGAAGTTGTCATAGTGAATCAAGCAATTGATCCTGCCCTGGAAGAGTTAGTGCAAATCGCACAATGTGTAGCACTAGATTGTCCTGTCACTGATGTTGGTGTTTTGGTGCAAAGACTGGCTGAACTTGTTACAGGGCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGCTACGGACATCTCTTCAGACAAGTATGTTACCTATAGGGTCTATAAATATTGGCCTATCCAGGCACCGTGCTCTGCTTTTTAAGGTATTGTCTGACAATATCAAGATGCCCTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGTACTCTTATTCCAACTGATATTTTTAATCCTAAAGACCCTTCCTTTAAGCCATACAATCCCAAGAATTTTCCAGCCTTACAGTCAACAAATGAAAATAGATTTTCTTACCCAAGACCTTTGTCATCTGATGGTGAAGGCAGTAGTCAAAGTTCTGCGATCAGAAGTGATTCATCATCATTGAATGTGAGACCATATTTTGGGAAGTCTGATTATATGTCTTCAAACCTGAGTTTGGGTGGAGAAACTGGTGTTGGTCCTTCCAAAGTTCCTAGTAAAGCATCTTCTAGCCAAGCAGACAATTTTTTTCCATCAGCCAGTAGTTCTCTGTACAAAGGAACTCGTGGAATGAATGCTATTGGTGATGGGACTAGACTGAACATCAATGTTGTACCATATGGTCAGAATGGTCCAGATGACTCTAGGAACCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACGGGCAAGACTGCTGTACACAACAAACCCGTGGAAAATCAAGCTCCTGAACTTCATAGTACGAAAGAAAACAAATTTTCTGGTCGACCCCCGGTACCTTTGATGTGGAAGAACCGTTATGCATACAATGAAGATCCCAGGAAACTTAACCGTAATCCTAATGAATATAACCCTTCTTCGTTAGCTTCCAATAGTTCTTCTGTATCGGAAAAAGTTGATGTCAATAATTCCAACTCATCATACCATGCAAATATCAATAGAGACAAAGAGAGGAGCTTGATGCAAGTTACTGGCACAGTATCAGCATCTGGTTCTGGTGATCTGAACAGGGATGAAGGTTTCAATGCTGAATGGAACAAAGGGAATGTGGAAAAATCTCAAAACAGCATAGCAGATGTTGTCAAAGAACAGGAAAACAATGAAATTGGATTTCATGACCGAAGAAAAAGCACTCATGACAGATTCATGGGTAGCAAGTTGAAACTAAAGGAGCTAGAGAGTCCTAGTTCATCAGTTGATTCCATCACAAATAGGGTTGACCAAATCTTGGATGATGTAGATGTGGGCGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATATCAAGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAGTTTTTGGATCAGGATTTTTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCTAATGTTGTTCTTTTTATGGGTGCTGTTACTCGACCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCTAGGGGAAGTTTGTACCGAATTCTTCATCGTCCTAATTGTCAAATTGATGAAAAACGCAGAATTAAAATGGCTCTGGACGTGGCAAGAGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGTGATCTGAAGTCACCAAATCTCTTGGTTGATAAGAACTGGAATGTTAAGGTTTGTGATTTTGGGTTGTCGCGACTGAAGCATAACACATTTTTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGGAATGAGCCCTCAAATGAGAAGTGTGATGTATACAGTTTTGGAGTCATTCTATGGGAGCTTGCTACTCTAAAGTTGCCATGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGTCGTTTAGATATCCCCAAGGAAGTTGATCCTTTAGTTGCAAGAATTATCTGGGAATGTTGGCAACAGGATCCCAATTCGCGACCCTCATTTGCACAGCTCACGGTAGCACTAAAGCCCCTGCAGCGTCTAGTAATACGTCTCATCAAGACCAGCCAGCTTCAACTTAGGCGCAGGAGATTTCTGTAA 2859 0.4341 MKNIFKKLHKASNHDPNRSNETPASVASASDASDHRPAPLQNSAPSPASPSSLSPSSAAAGASQPPPATPNRQDYFLSEEEYQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGHRIDSAMNRDDVAKALSRQYWEYNVLDYEEKVVDGFYDVYGLCTDSSMQGKMPSLEDLEANPGNSSFEVVIVNQAIDPALEELVQIAQCVALDCPVTDVGVLVQRLAELVTGHMGGPVKDANIILARWTERSTELRTSLQTSMLPIGSINIGLSRHRALLFKVLSDNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDIFNPKDPSFKPYNPKNFPALQSTNENRFSYPRPLSSDGEGSSQSSAIRSDSSSLNVRPYFGKSDYMSSNLSLGGETGVGPSKVPSKASSSQADNFFPSASSSLYKGTRGMNAIGDGTRLNINVVPYGQNGPDDSRNLFADLNPFQIKGTGKTAVHNKPVENQAPELHSTKENKFSGRPPVPLMWKNRYAYNEDPRKLNRNPNEYNPSSLASNSSSVSEKVDVNNSNSSYHANINRDKERSLMQVTGTVSASGSGDLNRDEGFNAEWNKGNVEKSQNSIADVVKEQENNEIGFHDRRKSTHDRFMGSKLKLKELESPSSSVDSITNRVDQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYQADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNSRPSFAQLTVALKPLQRLVIRLIKTSQLQLRRRRFL 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4488 952 MobiDBLite consensus disorder prediction 490 510 - -
Prci1g4488 952 MobiDBLite consensus disorder prediction 342 380 - -
Prci1g4488 952 MobiDBLite consensus disorder prediction 1 73 - -
Prci1g4488 952 CDD STKc_MAP3K-like 682 925 - -
Prci1g4488 952 MobiDBLite consensus disorder prediction 412 431 - -
Prci1g4488 952 Pfam Protein tyrosine and serine/threonine kinase 677 926 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Prci1g4488 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Prci1g4488 952 ProSiteProfiles Protein kinase domain profile. 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4488 952 MobiDBLite consensus disorder prediction 523 560 - -
Prci1g4488 952 MobiDBLite consensus disorder prediction 530 560 - -
Prci1g4488 952 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 PRINTS Tyrosine kinase catalytic domain signature 836 846 IPR001245 GO:0004672|GO:0006468
Prci1g4488 952 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Prci1g4488 952 FunFam Serine/threonine-protein kinase CTR1 755 938 - -
Prci1g4488 952 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 76 933 - -
Prci1g4488 952 FunFam Serine/threonine-protein kinase isoform 1 667 754 - -
Prci1g4488 952 MobiDBLite consensus disorder prediction 345 380 - -
Prci1g4488 952 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Prci1g4488 952 MobiDBLite consensus disorder prediction 406 431 - -
Prci1g4488 952 SUPERFAMILY Protein kinase-like (PK-like) 660 924 IPR011009 -
Prci1g4488 952 Gene3D Transferase(Phosphotransferase) domain 1 755 937 - -
Prci1g4488 952 SMART serkin_6 676 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4488 952 MobiDBLite consensus disorder prediction 17 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4488 Prci-Chr1 58497393 58505182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4488 1 912 MAP Kinase Kinase Kinase AT1G08720 57.717 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g4488 PK_Tyr_Ser-Thr 3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4488 - - aprc:113870732 1379.39