Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4433 ATGCTACGCAGGGACAATAGAATGGATTCTGTCAACAAAATAGAGATAGTCCCAGCCAATGATTCTTTAGTCAAACATAGCAAACGAAGCTTTCTGTTTCGTTCCTCCACTTCTGCCCAAGACTTGAGACATTTTGAACTTGAGAAGGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAAGCCTGCATACGAGACTTTGATTCTTCTCTACAATCATCCGAAATGGAGAATCGCTGTTCAAGGTCCAGGGCACAAATTAGTTGGAGCAAATATTTAAAAAATTTGAAGAAGAGGTCAATTAAGCGTCTAGCATCCTTCCCTCCTCTTGTTGCACCAACGATAGCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTGTTTTGACTAATGTATACAACTTTAGATCTTCGTTGGCGAACTTCACACTCTCTGAATTGATAAATGCAACCAACAATTTTAGCAATGAAAATATGATCGGAAGAGGTGGCTATTCTGAAGTTTACTGGGGTCGTCTCGGAGATGGGAGTTTAGTAGCTATCAAGAGATTGACTAAAGGGACTCCAGACGAGAGGACTGCAAGCTTTCTATCTGAGCTAGGTATTATTGCTCATGTTGACCATTCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGATCCAAGTAAAAGCAAGTTAGATTGGAGTAAAAGGTATAAGATTGCTCTGGGCGTAGCCAATGGCCTCCTCTACCTTCATGAGAGTTGTCACAGGCGAATCATTCATAGAGATATCAAGTCAGATAATATACTGCTCACTGAAAGCTTTGAGCCACAGATCTGTGACTTTGGGCTGGCAAAGTGGTTACCCAAACAATGCACTCACCATAATGTATCAAAATTTGAGGGCACATTTGGGTATTTTGCTCCTGAATATTTCATGCATGGTGTAGTGGATGAGAAAACTGACGTTTATTCTTTTGGGGTTATATTGTTGGAGCTTATAACTGGGCGTCCAGCTGTGGATGAAAATCAGCTTAGTGTTGTACTATGGGCAAAGCCTTTGCTTGATGATAATAATATTAAGGACCTTGTTGATCCTTGTCTTCGAAACGACTATGACAGAGAACAGATGGATCGGGTTGTTTTGACTGCATCTCTGTGCATTGAGCACTCTCCTGTCTTGCGTCCCTGCATGAGTCAGGTTGCAATACTGCTAAGAGATGATGACTATGTGAGACAACCTACAAATGCAAGCCGAAGGTGGTCTTTCCTTAGAACATACTCTCAAGAGCTTTTGGATGCTCAAGAATACAACTCAACTAAGTATCTAAATGATCTCAATCAACACAAGAAGATTGCTCTGGGATCTTAA 1359 0.4091 MLRRDNRMDSVNKIEIVPANDSLVKHSKRSFLFRSSTSAQDLRHFELEKEKEDVSSPRGVLEACIRDFDSSLQSSEMENRCSRSRAQISWSKYLKNLKKRSIKRLASFPPLVAPTIAKGKSKSSRENPVLTNVYNFRSSLANFTLSELINATNNFSNENMIGRGGYSEVYWGRLGDGSLVAIKRLTKGTPDERTASFLSELGIIAHVDHSNIAKLIGCDVGDPSKSKLDWSKRYKIALGVANGLLYLHESCHRRIIHRDIKSDNILLTESFEPQICDFGLAKWLPKQCTHHNVSKFEGTFGYFAPEYFMHGVVDEKTDVYSFGVILLELITGRPAVDENQLSVVLWAKPLLDDNNIKDLVDPCLRNDYDREQMDRVVLTASLCIEHSPVLRPCMSQVAILLRDDDYVRQPTNASRRWSFLRTYSQELLDAQEYNSTKYLNDLNQHKKIALGS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4433 452 Gene3D Transferase(Phosphotransferase) domain 1 222 416 - -
Prci1g4433 452 PANTHER OS08G0249100 PROTEIN 224 445 IPR046958 -
Prci1g4433 452 SMART serkin_6 155 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4433 452 SUPERFAMILY Protein kinase-like (PK-like) 135 399 IPR011009 -
Prci1g4433 452 Gene3D Phosphorylase Kinase; domain 1 115 221 - -
Prci1g4433 452 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 216 415 - -
Prci1g4433 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Prci1g4433 452 Pfam Protein tyrosine and serine/threonine kinase 158 219 IPR001245 GO:0004672|GO:0006468
Prci1g4433 452 ProSiteProfiles Protein kinase domain profile. 155 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4433 452 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Prci1g4433 452 Pfam Protein kinase domain 231 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4433 Prci-Chr1 58316719 58320881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4433 138 451 Trihelix Transcription Factor Family AT1G70460 38.192 3.14e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci1g4433 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4433 - - gmx:100781529 592.423