Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4411 ATGGCTGATTTTCAAACTTCTACACACCGCGCCAAGTGGATTTTCTCTCCTCCTCAACTGGCTGACAAATATAAAGCTGCTAATCAGAGAGCAATACAAGTTTTAGAGAAGTATGGAGCAACTCTTATGGAAGTAGATGTTGATGGGTCTCTGTCATATCCTTTACTCCAGAAGGATGATGCTGAAAAGCATTCTCGCCCTAAACCCCTTAGTATTGAAGAGGAACAATGTATCAGAGTATTTTACGAGAACAAATTACAAGAAGTGTGCAACAATTTTCACTTTCCTCATAAAATCCAGGCTACAGCGCTCATTTATTTTAAAAGGTTCTATCTACAGTGGTCCGTGATGGAACATCATCCAAAAAATATAATGCTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCTGCTGAGGAGCTTGGTAAGGGAATCTCACAGGATCACCAAATGATTCTCAATAATGAGATGATTGTTTATCAGAGTTTAGAATTTGACCTTATTGTGTATGCTCCATATCGCTCAGTTGATGGTTTTGTAAACAATATGGAGGAATTTTGCAAAGCTGGTGAAGAAGTGTTTCCAAGGTTGAAGGCCTTGCAAGACACTGCAAGATTGGATATTGATAAAATGATGCTTACAGATGCTCCACTTTTGTTTCCTCCTGGGCAGTTAGCATTGGCTGCTTTGCGAAATTCAAATGCTCTTCATAAAGTTCTCGACTTTGACAGTTACCTAAGAAGTATCATTTCCCACCAGAATTCTCCACATACTGTTTCTGAGCTCATTGGATCACTGAGTGCAATTGACTCGTTGGTAAAGAGATACAAATTTCCTTCAGAGAAGGAATTGAAGCATATTAATCGGAAATTGAAATCTTGTTGGGGTCTCAGCTCAAATGACGAGGGTAAAAAACGTGAGAAGAAATCAAAGCACAAGTCCAAAAAAGGCTCCAACGAATCTAAGCTTCTGTGA 987 0.3891 MADFQTSTHRAKWIFSPPQLADKYKAANQRAIQVLEKYGATLMEVDVDGSLSYPLLQKDDAEKHSRPKPLSIEEEQCIRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMEHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVDGFVNNMEEFCKAGEEVFPRLKALQDTARLDIDKMMLTDAPLLFPPGQLALAALRNSNALHKVLDFDSYLRSIISHQNSPHTVSELIGSLSAIDSLVKRYKFPSEKELKHINRKLKSCWGLSSNDEGKKREKKSKHKSKKGSNESKLL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4411 328 PANTHER CYCLIN 59 319 IPR043198 GO:0006357|GO:0016538
Prci1g4411 328 SUPERFAMILY Cyclin-like 62 173 IPR036915 -
Prci1g4411 328 SMART cyclin_7 84 165 IPR013763 -
Prci1g4411 328 CDD CYCLIN_AcCycH_rpt1 3 171 - -
Prci1g4411 328 CDD CYCLIN_AcCycH_rpt2 174 298 - -
Prci1g4411 328 FunFam Cyclin h 174 279 - -
Prci1g4411 328 SUPERFAMILY Cyclin-like 176 301 IPR036915 -
Prci1g4411 328 FunFam cyclin-H1-1 60 172 - -
Prci1g4411 328 Pfam Cyclin, N-terminal domain 67 171 IPR006671 -
Prci1g4411 328 Pfam Cyclin C-terminal domain 176 277 IPR031658 -
Prci1g4411 328 Gene3D - 174 279 - -
Prci1g4411 328 Gene3D - 60 172 - -
Prci1g4411 328 MobiDBLite consensus disorder prediction 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4411 Prci-Chr1 58061108 58066309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4411 1 277 Core Cell Cycle Gene Families AT5G27620 65.714 2.92e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4411 K06634 - cave:132171741 529.25