Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4377 ATGACGACCATGACGATGGAGGGAATGATGGACAAGGCCGTGCTGGATGATATCATACGGAGGCTCCTCGAAGGCAAAGAAGGGAAACAGGTCCAGCTCTCCGAGTCGGAGATCCGTCAGCTCTCCGTCAACGCTCGCCAAATCTTCCTCTCTCAGCCCATTCTCCTCGAGCTCCATGCTCCTATCCACATCGGCGGTGATATACATGGGCAGTACCAAGACTTACTGAGGCTTTTTGAATATGGTGGCTACCCTCCTTCTGCAAACTATTTGTTTCTAGGGGATTATGTAGACAGAGGAAAGCAAAGTTTGGAGACAATATGTTTACTTCTGGCCTACAAAATAAGGTACCCCAACAAAATATATCTGTTGAGAGGAAACCATGAAGATGCAAAGATAAATCGGATATATGGATTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTCTGGAAGATATTTTCTGACTGCTTTAACTGTTTGCCAATAGCTGCACTAATTGATGACAAGATACTCTGTATGCACGGAGGCCTCTCTCCAGAATTGAAAAATTTGGATCAGATAAGGGAAATTTCAAGGCCTACTGATGTTCCGGACAATGGTCTTCTCTGTGATCTGCTCTGGTCTGATCCTGATACTAGGATTGAGGGCTGGGCAGAAAGTGACCGAGGCATCTCAAGTAATTTTGGCGCTGATGCAGTCACGATGTTTTTGGATGAAAATGACCTCGATCTCATTTGCCGAGGCCATCAGGTGGTGGAGGACGGATATCTGTTTTTTGCTAAACGAAGGTTAGTCACTATATTCTCTGCTCCAAACTATGGGGGGAGTTCGACAACGTTGGCGCATTGTTGA 858 0.4534 MTTMTMEGMMDKAVLDDIIRRLLEGKEGKQVQLSESEIRQLSVNARQIFLSQPILLELHAPIHIGGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPNKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFSDCFNCLPIAALIDDKILCMHGGLSPELKNLDQIREISRPTDVPDNGLLCDLLWSDPDTRIEGWAESDRGISSNFGADAVTMFLDENDLDLICRGHQVVEDGYLFFAKRRLVTIFSAPNYGGSSTTLAHC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4377 285 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Prci1g4377 285 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 18 278 - -
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Prci1g4377 285 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Prci1g4377 285 FunFam Serine/threonine-protein phosphatase 6 283 - -
Prci1g4377 285 Pfam Calcineurin-like phosphoesterase 66 253 IPR004843 GO:0016787
Prci1g4377 285 Gene3D - 7 285 IPR029052 -
Prci1g4377 285 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Prci1g4377 285 SMART pp2a_7 33 285 IPR006186 GO:0016787
Prci1g4377 285 SUPERFAMILY Metallo-dependent phosphatases 12 277 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4377 Prci-Chr1 57835821 57838552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4377 13 249 Calmodulin-binding Proteins AT5G63870 29.371 1.31e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4377 K06269 - gmx:100805030 515.768