Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4350 ATGGGCCATTTATCGTCCATGTTCAACGGGTTGGCGAGATCGTTCTCAATGAAGAAAGGGAAGAGTTCTGGGAAATGCGATGGGAGAGAAGCCGCCGAAGCGATGGCCAAGGAAGCGAAGAAAAATGACCAGATGCTTCATACTTCTGGCACCGTCCATGTCCAGGGCTCCAACAATTTCGCCTCAGTTTTTTCCAAGAGAGGCCAGAAAGGAGTCAACCAGGATTGTTGCATGGTTTGGGAGGAATTTGGATGTCAAGAGGACATGATGTTCTGTGGGGTATTTGACGGCCATGGACCATGGGGTCACTTCGTGGCTAAGAGAGTAAGAGAGTCCATGGCTCCATCTTTGTTGTGTAACTGGCAGGAGGCACTTGCTCAGACCTCTCTTGATCCTGATTTCGACTTAGAGGATGAAAAAAAACAACAGCCCTTCAATATATGGAAGCACTCCTACTTGAAGACATGTGCCGCCATTGATCACGAGCTAGAGCGCTCTCGCAAGATCGATTCTTTCTACAGCGGAACCACTGCTCTCTCCATTGTCCGGCAGGGTGAACTAATCGTTGTCGCAAATGTCGGTGACTCTCGGGCTGTACTAGCCACAACATCAGACGATCAAAGATTAGTGCCAGTACAGCTGACTGTTGATTTCAAGCCCAACCTGCCTCAGGAGGCAGAGCGTATAATTCAGTGTCAGGGACGAGTGTTCTGCTTAGACGATGAACCCGGAGTTCACAGAGTGTGGCTGCCCGACGGAGAGTCGCCGGGACTGGCCATGTCCAGAGCCTTCGGAGACTACTGCGTGAAGGATTATGGCCTTATTTCGGTTCCTGAGGTAACACACAGGACTATCACTAGCAGAGACCAATTCGTTGTGCTGGCAACAGACGGGGTGTGGGATGTGATATCGAATGAAGAAGCAGTGGAAATAGTGGGTTCATCAGAAGACAGAGGGAAGTCAGCAAGAATATTGGTGGAGTGTGCGGTAAGGGCATGGAAACGTAAGCGACGGGGCATCGCCATGGATGACATTTCTGCAATTTGTGTATTCTTGCATCCTCCTCCTCCGTCTCTCCTAAAGTAG 1086 0.5009 MGHLSSMFNGLARSFSMKKGKSSGKCDGREAAEAMAKEAKKNDQMLHTSGTVHVQGSNNFASVFSKRGQKGVNQDCCMVWEEFGCQEDMMFCGVFDGHGPWGHFVAKRVRESMAPSLLCNWQEALAQTSLDPDFDLEDEKKQQPFNIWKHSYLKTCAAIDHELERSRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDDQRLVPVQLTVDFKPNLPQEAERIIQCQGRVFCLDDEPGVHRVWLPDGESPGLAMSRAFGDYCVKDYGLISVPEVTHRTITSRDQFVVLATDGVWDVISNEEAVEIVGSSEDRGKSARILVECAVRAWKRKRRGIAMDDISAICVFLHPPPPSLLK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4350 361 PANTHER PROTEIN PHOSPHATASE 40 350 IPR015655 GO:0004722|GO:0006470
Prci1g4350 361 MobiDBLite consensus disorder prediction 17 42 - -
Prci1g4350 361 MobiDBLite consensus disorder prediction 20 42 - -
Prci1g4350 361 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Prci1g4350 361 Gene3D - 37 353 IPR036457 -
Prci1g4350 361 Pfam Protein phosphatase 2C 83 324 IPR001932 -
Prci1g4350 361 SUPERFAMILY PP2C-like 51 355 IPR036457 -
Prci1g4350 361 FunFam Probable protein phosphatase 2C 34 51 354 - -
Prci1g4350 361 CDD PP2Cc 59 352 IPR001932 -
Prci1g4350 361 SMART PP2C_4 51 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4350 Prci-Chr1 57689200 57692129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4350 1 353 PP2C-type Phosphatase Gene Family AT3G05640 69.577 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4350 - - gmx:100801309 616.305