Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4340 ATGGCGACAGAACAGGTATTGCCATTCTCAGTGTTATCTGTCGTTGAAGATGTTCTTCAACAGAATGGGACCCAATTGGGCGATACCAACTCGGCGTCAAGGAAACTTGAACCATCTTGCTTAAGAAGGTATGAAGCTGCTGGGTGGTTGCGGAAGGAATATGGAGTAATTGGAGGGAAAGAGTTTCCAGCAGAGCCTTCTGAAGAAGAATTCAGGAATGGTTTGCGTAGTGGCATAATCCTTTGCAACGTTCTTAACAGAATTCAACCTGGCGTGGTGCCCAAGGTAGTTGAAGGTCCCTGCGATTCCGATGATGGAGCCGCAGCACTATCTGCATTTCAATACTTTGAAAATGTGAGGAACTGCCTGGTAGCTTTGCAAGAAATGGGCCTTCCTACCTTTCAAGCTTCTGATTTGGAGCAGGGAGGGAAATCAGCTAGGCTAGTGGATTGTGTTTTGGCAATCAAGGCATATAGTGAATGGAAAGAGGGAGGGAAAATAGGGTCATGGAAACATGGTGGGAACATAAAGCCACTCGTTTCTAGAAGACCCTTTTTGCGCAAAAACTCGGAACAATTCCTCCCTACTTTAACAAGGACCACAAGTGAGAAAGATGGATTGACGAGTGATCGATCTACAAGCAGTGATCTAGGGCAGGACCGCAACGGTTCAGTTCATAACTTGAATGCACTACTTCGGGAATATTTGTCTGACAAGAAGCATGAAGAGATTATCAACGTAGTGGAGTCCCTGCTTCGCAAAGTTACAGAGGAGTTTGAACGTCGCCTCTTAATACAACATGAAATGTCGAAAACAAATCCAGAAGATAGGGCTGCGGAATCTGAAACACTCAACTCAATTTTAAAAATTGCTTCTGAGGACGAGCAGATGGAAGAAAAGGAAGATGTGCAGCCTAAACAAGAGGAGTGTTACGATGAAGAGCACTGCGACAATGAAGAATCAAGACTCCAAGTATTGAACGAGCAGCAAAATTTGGTTTCTCAACAACACCTAGAAATCCACTGTAGCGGTGAAGTATCGAGAATCCACGTTTCGAAGAACCAACAAAAGTTGCTCGTACAACAACACAAAGAGATCCAGGAATTGAAAATTATCGCCCATCATACGAAATCAGGAATGCACTCTTTACAAAAGGCATGCCAGCAGGACCTAATCTTTTTGAGTAAGCATGTGCATAGCCTAGCTTCTGCAGCTTCAGGGTATCGGAGAGTACTTGAAGAAAATCGCAAGTTATACAACCAACTGCAGGACCTGAAAGGAAATATTAGAGTATACTGCCGAGTCCGACCCTTCTTTGGGCAAGCAAACAATGCTGGCTCTGTTGGTGGCATAGAGGAAGGAAGTATCTCAATGATAATACCTTCAAAGTACGGAAAGGAAGGGAGAAAAACGTTTAATTTCAACAGGGTGTTTGGTCCTACAGCAACCCAAGCTGAGGTTTTTGCGGACATGCAGCCTCTCATTCGTTCTGTTTTGGATGGCTACAATGTCTGCATATTTGCTTATGGCCAAACAGGCTCAGGAAAAACTCACACTATGTCCGGACCAAATGATCTTACTGAGGAAACCGTGGGGGTCAACTATAGGGCACTAAGAGATCTTTTCTTACTGTCACAGCAGAGGAAAGACACTATTGCCTATGACATCGGAGTTCAGATGCTTGAGATCTACAATGACCAAGTCAGAGATCTTCTAGCGACTGATGGTGGCAACAAAAAGTTAGAAATTCGCAACAGTTCTCAAAATGGCATTAACGTACCAGATGCAACCCTCGTTCCTGTTTCATCGACTTCCGATGTCTTGAGTTTGATGGACTTGGGACATAAGAATCGGGCAGTTAGTGCTACTGCTATGAATGATCGTAGTAGTCGTTCTCATAGTTGCCTGACAGTCCATGTTCAAGGAAGGGACCTGACGTCAGGAAGCCATCTTCGTGGCAGCATGCATCTAGTTGACTTGGCAGGAAGTGAGAGGGTCGATAAATCTGAAGTCACAGGTGATAGGCTTAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCCTTAGGAGATGTCATTTCTTCGCTGGCCAATAAGCAAGCGCATGTTCCTTACAGGAACAGTAGACTTACTCAACTGCTTCAAGATTCTCTTGGAGGGCAAGCCAAGACACTCATGTTCGTACATATTAGCCCAGAACCTGACGCTCTTGGAGAAACACTCAGCACACTCAAGTTTGCAGAACGCGTCTCCACAGTTGAACTTGGTGCTGCCCGAGCTAACAAAGAGAGTTCAGAAGTGAAAGAGCTTAAAGAACAGATTGCTAATTTGAAGGCAGCTTTGGCAAGAAGGGAGGGAGAAGAGGAACCACTTCAACATTCTGGAAATAGTAGTCAAGATGCACCAAAATTGAAATCTTACAAATCTTCTCCTACACAATCTGGAGGTCATAGGAAACCCCAAGATGATTCTGGTAGCGTGGAGAGCCAGAAGAGGGCCACAACGAAGCTGAAAAGACGAAGCTTAGATCTCCAAGACATGATAATGCATTCACCTCCCTGGCCACCTGCGAGCAGTCAGAGGCTGAACATGAAGGAAGAGGATAAGGAATCGGTTTCCAGGGACTGGGTTGATAAGATCATGGTGAACAGGAATGACAGCCTAACAAGTGATGATAGCCTAGTGGGTCAGTGGGAAGCAGAAAGCAAACAGTCTTCTCCCTTGTTGAGTCCCAGCTCTCTTTCAGACACTGCAAAAGTATACTCGGAACATTCCTTTAAAGTTACATTGAATAAAAAGGATAGCCAAGACTATGACATGGCCACCACAGATGACTCTGATGATCCGCTCGAGGTTGCAACTAGCGATTCCTCAGAATCAGACTTGCATTGGCAACCACATGTGCCAAAACCAACCAGCAAAATCAATGGAATAGTTTCAAAAGCTAAGAAACCCACCCATCACAAACTGGTAAAGAACGTAGAAACCAGGAGCATGATTCCGTCCTTGATCCCTGCGCCGTCAAGGAAACAATTGGTGAGTCAACCCAGAAAGCAGGCAAGTCCTATCGATGGAAAAAGAACTGGGAATGCAAAGTGA 3099 0.4492 MATEQVLPFSVLSVVEDVLQQNGTQLGDTNSASRKLEPSCLRRYEAAGWLRKEYGVIGGKEFPAEPSEEEFRNGLRSGIILCNVLNRIQPGVVPKVVEGPCDSDDGAAALSAFQYFENVRNCLVALQEMGLPTFQASDLEQGGKSARLVDCVLAIKAYSEWKEGGKIGSWKHGGNIKPLVSRRPFLRKNSEQFLPTLTRTTSEKDGLTSDRSTSSDLGQDRNGSVHNLNALLREYLSDKKHEEIINVVESLLRKVTEEFERRLLIQHEMSKTNPEDRAAESETLNSILKIASEDEQMEEKEDVQPKQEECYDEEHCDNEESRLQVLNEQQNLVSQQHLEIHCSGEVSRIHVSKNQQKLLVQQHKEIQELKIIAHHTKSGMHSLQKACQQDLIFLSKHVHSLASAASGYRRVLEENRKLYNQLQDLKGNIRVYCRVRPFFGQANNAGSVGGIEEGSISMIIPSKYGKEGRKTFNFNRVFGPTATQAEVFADMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNDLTEETVGVNYRALRDLFLLSQQRKDTIAYDIGVQMLEIYNDQVRDLLATDGGNKKLEIRNSSQNGINVPDATLVPVSSTSDVLSLMDLGHKNRAVSATAMNDRSSRSHSCLTVHVQGRDLTSGSHLRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLANKQAHVPYRNSRLTQLLQDSLGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARANKESSEVKELKEQIANLKAALARREGEEEPLQHSGNSSQDAPKLKSYKSSPTQSGGHRKPQDDSGSVESQKRATTKLKRRSLDLQDMIMHSPPWPPASSQRLNMKEEDKESVSRDWVDKIMVNRNDSLTSDDSLVGQWEAESKQSSPLLSPSSLSDTAKVYSEHSFKVTLNKKDSQDYDMATTDDSDDPLEVATSDSSESDLHWQPHVPKPTSKINGIVSKAKKPTHHKLVKNVETRSMIPSLIPAPSRKQLVSQPRKQASPIDGKRTGNAK 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4340 1032 SMART ch_5 42 158 IPR001715 GO:0005515
Prci1g4340 1032 Coils Coil 760 787 - -
Prci1g4340 1032 ProSiteProfiles Kinesin motor domain profile. 428 753 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 923 IPR027640 GO:0003777|GO:0007018
Prci1g4340 1032 MobiDBLite consensus disorder prediction 792 820 - -
Prci1g4340 1032 Gene3D Kinesin motor domain 370 755 IPR036961 -
Prci1g4340 1032 MobiDBLite consensus disorder prediction 995 1032 - -
Prci1g4340 1032 PRINTS Kinesin heavy chain signature 501 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 PRINTS Kinesin heavy chain signature 654 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 PRINTS Kinesin heavy chain signature 703 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 PRINTS Kinesin heavy chain signature 623 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 Pfam Kinesin motor domain 435 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 CDD CH_AtKIN14-like 42 157 - -
Prci1g4340 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 785 IPR027417 -
Prci1g4340 1032 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
Prci1g4340 1032 ProSiteProfiles Calponin homology (CH) domain profile. 40 160 IPR001715 GO:0005515
Prci1g4340 1032 SUPERFAMILY Calponin-homology domain, CH-domain 42 174 IPR036872 -
Prci1g4340 1032 CDD KISc_C_terminal 426 755 - -
Prci1g4340 1032 ProSitePatterns Kinesin motor domain signature. 653 664 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci1g4340 1032 SMART kinesin_4 426 761 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4340 1032 MobiDBLite consensus disorder prediction 931 976 - -
Prci1g4340 1032 Gene3D - 34 160 IPR036872 -
Prci1g4340 1032 MobiDBLite consensus disorder prediction 196 223 - -
Prci1g4340 1032 MobiDBLite consensus disorder prediction 781 874 - -
Prci1g4340 1032 Coils Coil 408 428 - -
Prci1g4340 1032 FunFam Kinesin-like protein KIN-14I isoform A 423 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4340 Prci-Chr1 57634348 57640652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4340 352 791 Calmodulin-binding Proteins AT5G65930 38.789 1.44e-80 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4340 K10406 - gmx:100799535 1241.87