Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4339 ATGGCGACAGAACAGGTATTGCCATTCTCAGTGTTATCTGTCGTTGAAGATGTTCTTCAACAGAATGGGACCCAATTGGGCGATACCAACTCGGCGTCAAGGAAACTTGAACCATCTTGCTTAAGAAGGTATGAAGCTGCTGGGTGGTTGCGGAAGGAATATGGAGTAATTGGAGGGAAAGAGTTTCCAGCAGAGCCTTCTGAAGAAGAATTCAGGAATGGTTTGCGTAGTGGCATAATCCTTTGCAACGTTCTTAACAGAATTCAACCTGGCGTGGTGCCCAAGGTAGTTGAAGGTCCCTGCGATTCCGATGATGGAGCCGCAGCACTATCTGCATTTCAATACTTTGAAAATGTGAGGAACTGCCTGGTAGCTTTGCAAGAAATGGGCCTTCCTACCTTTCAAGCTTCTGATTTGGAGCAGGGAGGGAAATCAGCTAGGCTAGTGGATTGTGTTTTGGCAATCAAGGCATATAGTGAATGGAAAGAGGGAGGGAAAATAGGGTCATGGAAACATGGTGGGAACATAAAGCCACTCGTTTCTAGAAGACCCTTTTTGCGCAAAAACTCGGAACAATTCCTCCCTACTTTAACAAGGACCACAAGTGAGAAAGATGGATTGACGAGTGATCGATCTACAAGCAGTGATCTAGGGCAGGACCGCAACGAAGGGGGTTCAGTTCATAACTTGAATGCACTACTTCGGGAATATTTGTCTGACAAGAAGCATGAAGAGATTATCAACGTAGTGGAGTCCCTGCTTCGCAAAGTTACAGAGGAGTTTGAACGTCGCCTCTTAATACAACATGAAATGATGGAAGAAAAGGAAGATGTGCAGCCTAAACAAGAGGAGTGTTACGATGAAGAGCACTGCGACAATGAAGAATCAAGACTCCAAGTATTGAACGAGCAGCAAAATTTGGTTTCTCAACAACACCTAGAAATCCACTGTAGCGGTGAAGTATCGAGAATCCACGTTTCGAAGAACCAACAAAAGTTGCTCGTACAACAACACAAAGAGATCCAGGAATTGAAAATTATCGCCCATCATACGAAATCAGGAATGCACTCTTTACAAAAGGCATGCCAGCAGGACCTAATCTTTTTGAGTAAGCATGTGCATAGCCTAGCTTCTGCAGCTTCAGGGTATCGGAGAGTACTTGAAGAAAATCGCAAGTTATACAACCAACTGCAGGACCTGAAAGGAAATATTAGAGTATACTGCCGAGTCCGACCCTTCTTTGGGCAAGCAAACAATGCTGGCTCTGTTGGTGGCATAGAGGAAGGAAGTATCTCAATGATAATACCTTCAAAGTACGGAAAGGAAGGGAGAAAAACGTTTAATTTCAACAGGGTGTTTGGTCCTACAGCAACCCAAGCTGAGGTTTTTGCGGACATGCAGCCTCTCATTCGTTCTGTTTTGGATGGCTACAATGTCTGCATATTTGCTTATGGCCAAACAGGCTCAGGAAAAACTCACACTATGTCCGGACCAAATGATCTTACTGAGGAAACCGTGGGGGTCAACTATAGGGCACTAAGAGATCTTTTCTTACTGTCACAGCAGAGGAAAGACACTATTGCCTATGACATCGGAGTTCAGATGCTTGAGATCTACAATGACCAAGTCAGAGATCTTCTAGCGACTGATGGTGGCAACAAAAAGTTAGAAATTCGCAACAGTTCTCAAAATGGCATTAACGTACCAGATGCAACCCTCGTTCCTGTTTCATCGACTTCCGATGTCTTGAGTTTGATGGACTTGGGACATAAGAATCGGGCAGTTAGTGCTACTGCTATGAATGATCGTAGTAGTCGTTCTCATAGTTGCCTGACAGTCCATGTTCAAGGAAGGGACCTGACGTCAGGAAGCCATCTTCGTGGCAGCATGCATCTAGTTGACTTGGCAGGAAGTGAGAGGGTCGATAAATCTGAAGTCACAGGTGATAGGCTTAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCCTTAGGAGATGTCATTTCTTCGCTGGCCAATAAGCAAGCGCATGTTCCTTACAGGAACAGTAGACTTACTCAACTGCTTCAAGATTCTCTTGGAGGGCAAGCCAAGACACTCATGTTCGTACATATTAGCCCAGAACCTGACGCTCTTGGAGAAACACTCAGCACACTCAAGTTTGCAGAACGCGTCTCCACAGTTGAACTTGGTGCTGCCCGAGCTAACAAAGAGAGTTCAGAAGTGAAAGAGCTTAAAGAACAGATTGCTAATTTGAAGGCAGCTTTGGCAAGAAGGGAGGGAGAAGAGGAACCACTTCAACATTCTGGAAATAGTAGTCAAGATGCACCAAAATTGAAATCTTACAAATCTTCTCCTACACAATCTGGAGGTCATAGGAAACCCCAAGATGATTCTGGTAGCGTGGAGAGCCAGAAGAGGGCCACAACGAAGCTGAAAAGACGAAGCTTAGATCTCCAAGACATGATAATGCATTCACCTCCCTGGCCACCTGCGAGCAGTCAGAGGCTGAACATGAAGGAAGAGGATAAGGAATCGGTTTCCAGGGACTGGGTTGATAAGATCATGGTGAACAGGAATGACAGCCTAACAAGTGATGATAGCCTAGTGGGTCAGTGGGAAGCAGAAAGCAAACAGTCTTCTCCCTTGTTGAGTCCCAGCTCTCTTTCAGACACTGCAAAAGTATACTCGGAACATTCCTTTAAAGTTACATTGAATAAAAAGGATAGCCAAGACTATGACATGGCCACCACAGATGACTCTGATGATCCGCTCGAGGTTGCAACTAGCGATTCCTCAGAATCAGACTTGCATTGGCAACCACATGTGCCAAAACCAACCAGCAAAATCAATGGAATAGTTTCAAAAGCTAAGAAACCCACCCATCACAAACTGGTAAAGAACGTAGAAACCAGGAGCATGATTCCGTCCTTGATCCCTGCGCCGTCAAGGAAACAATTGGTGAGTCAACCCAGAAAGCAGGCAAGTCCTATCGATGGAAAAAGAACTGGGAATGCAAAGTGA 3024 0.4507 MATEQVLPFSVLSVVEDVLQQNGTQLGDTNSASRKLEPSCLRRYEAAGWLRKEYGVIGGKEFPAEPSEEEFRNGLRSGIILCNVLNRIQPGVVPKVVEGPCDSDDGAAALSAFQYFENVRNCLVALQEMGLPTFQASDLEQGGKSARLVDCVLAIKAYSEWKEGGKIGSWKHGGNIKPLVSRRPFLRKNSEQFLPTLTRTTSEKDGLTSDRSTSSDLGQDRNEGGSVHNLNALLREYLSDKKHEEIINVVESLLRKVTEEFERRLLIQHEMMEEKEDVQPKQEECYDEEHCDNEESRLQVLNEQQNLVSQQHLEIHCSGEVSRIHVSKNQQKLLVQQHKEIQELKIIAHHTKSGMHSLQKACQQDLIFLSKHVHSLASAASGYRRVLEENRKLYNQLQDLKGNIRVYCRVRPFFGQANNAGSVGGIEEGSISMIIPSKYGKEGRKTFNFNRVFGPTATQAEVFADMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNDLTEETVGVNYRALRDLFLLSQQRKDTIAYDIGVQMLEIYNDQVRDLLATDGGNKKLEIRNSSQNGINVPDATLVPVSSTSDVLSLMDLGHKNRAVSATAMNDRSSRSHSCLTVHVQGRDLTSGSHLRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLANKQAHVPYRNSRLTQLLQDSLGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARANKESSEVKELKEQIANLKAALARREGEEEPLQHSGNSSQDAPKLKSYKSSPTQSGGHRKPQDDSGSVESQKRATTKLKRRSLDLQDMIMHSPPWPPASSQRLNMKEEDKESVSRDWVDKIMVNRNDSLTSDDSLVGQWEAESKQSSPLLSPSSLSDTAKVYSEHSFKVTLNKKDSQDYDMATTDDSDDPLEVATSDSSESDLHWQPHVPKPTSKINGIVSKAKKPTHHKLVKNVETRSMIPSLIPAPSRKQLVSQPRKQASPIDGKRTGNAK 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4339 1007 ProSiteProfiles Kinesin motor domain profile. 403 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 Coils Coil 383 403 - -
Prci1g4339 1007 MobiDBLite consensus disorder prediction 837 856 - -
Prci1g4339 1007 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 898 IPR027640 GO:0003777|GO:0007018
Prci1g4339 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 760 IPR027417 -
Prci1g4339 1007 CDD KISc_C_terminal 401 730 - -
Prci1g4339 1007 MobiDBLite consensus disorder prediction 970 1007 - -
Prci1g4339 1007 SMART kinesin_4 401 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 FunFam Kinesin-like protein KIN-14I isoform A 398 770 - -
Prci1g4339 1007 Pfam Kinesin motor domain 410 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 MobiDBLite consensus disorder prediction 858 891 - -
Prci1g4339 1007 MobiDBLite consensus disorder prediction 193 225 - -
Prci1g4339 1007 MobiDBLite consensus disorder prediction 211 225 - -
Prci1g4339 1007 PRINTS Kinesin heavy chain signature 476 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 PRINTS Kinesin heavy chain signature 598 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 PRINTS Kinesin heavy chain signature 678 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 PRINTS Kinesin heavy chain signature 629 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4339 1007 MobiDBLite consensus disorder prediction 767 795 - -
Prci1g4339 1007 SMART ch_5 42 158 IPR001715 GO:0005515
Prci1g4339 1007 MobiDBLite consensus disorder prediction 906 952 - -
Prci1g4339 1007 Gene3D - 34 160 IPR036872 -
Prci1g4339 1007 Coils Coil 735 762 - -
Prci1g4339 1007 CDD CH_AtKIN14-like 42 157 - -
Prci1g4339 1007 ProSitePatterns Kinesin motor domain signature. 628 639 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci1g4339 1007 Gene3D Kinesin motor domain 344 730 IPR036961 -
Prci1g4339 1007 ProSiteProfiles Calponin homology (CH) domain profile. 40 160 IPR001715 GO:0005515
Prci1g4339 1007 MobiDBLite consensus disorder prediction 756 891 - -
Prci1g4339 1007 SUPERFAMILY Calponin-homology domain, CH-domain 42 174 IPR036872 -
Prci1g4339 1007 Pfam Calponin homology (CH) domain 43 159 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4339 Prci-Chr1 57634348 57640652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4339 327 766 Calmodulin-binding Proteins AT5G65930 38.789 7.35e-81 285