LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g4329	ATGTTATATAGACACAAACTCGTTTTCTTGACTATTCCGTACTCTCTGCTACCCGCTCTGGAAATTTTCATGAACTCAAGTTTTAAGCGTGTGGGACCGACCAATTGCAGTTGCTCGCTTGAGGAGTCCTTGTCGCCGTATAGTCAAGTGTTGTATCGATGGCAGCATCGAAAAGGCCACCACAACCCATGGATCGACAGGGATGGTGAAGCTCCCTGTAACATGTCCAAGAGGAGACCAGGCGGCTCAGTTCCAACACTGATCGGAGCCATGGGTGACACAATCAAAGAAGACCGCTTGGTGAAAAAAATTTTAGAACCAAGGATTAGGAATATGGTAGGAGAAGAAGTTACGACTGTACTGGAGCGGCACCTTCTCCGATTGCCAAGCAGACAAAATCTTGATCAGAGAGCAGCGCCTGAAGGAAGACGGAAAGATCTCCAATTGCGTTTCAAGGAATCGCCTAGCGAGGCTTATACAGGCTCTAGGCTTGGGGCCAAGAACGGGGCTTCACTTGAAGTTGCTCTGTATCAGTGTGATGGTGCCGGAGTTCAGGACCGCATAGTCACGGAAGGTCCTCTATCCAACACAAGGATAGAGTTGTGCGTTTTGCAGGGCAGCTTCGGTTCCGACGGTCGTGAGGATTGGAGCTCAGAGGATTTCCGTGACAGCATATTAAGAGATAGAAGAAGAGGTGGCCTTTTACTTGATGGGGATAGGTTCTTGAGACTAAAAAATGGAGTGGGTATTCTCACCAACCTTCGTGTCACCGATGGCTCGAAATACGATAGAACCGGAAAATTCAGATTAGGAGCCAGAGTTGCGGAACCAAATCCCAATGCAGCAAACGTTAGGGAAGGTGTGAGCCAGCCTTTTAAGGTCAAGGATGGCCGTGGACTGAGCTACCAGAAATATGACATCCCATCATTAAATGATGAGATTTGGCGTTTGGAAGGCATAGCAAAAGGTGGGAAAAGACATAATGAGCTGCAATCCAAAGGAGTAACGACGGTCGAGGCTTTCTTGAATCGGCTTAATACAGACCCAAATCAACTGAAACAGGACCTTGGCAAAATTGGAGAGAAGACGTGGAAAAAGCTTATCCTCCATGCTGCTAAAGCCTGTGCCAGACACGATGCTACGCAACCGTTTCTTTCCACAGGTCCTCTTGTCTCAGAACCACAGCATTTGGTGGGGAGTGCTGAAAATCTTCAAGCTAGGCAGGGCCTGCCACAACATGAACTTCTACCTCTCGCTTCCCAAGGTTTGAGCGTCCTGTCCGCCTCTACATCGCATTTCGGTGAAAGCAGTACATGTTGGACAACTAGAGGGAGTGAGTTATGCAGGGGGTGA	1353	0.4841	MLYRHKLVFLTIPYSLLPALEIFMNSSFKRVGPTNCSCSLEESLSPYSQVLYRWQHRKGHHNPWIDRDGEAPCNMSKRRPGGSVPTLIGAMGDTIKEDRLVKKILEPRIRNMVGEEVTTVLERHLLRLPSRQNLDQRAAPEGRRKDLQLRFKESPSEAYTGSRLGAKNGASLEVALYQCDGAGVQDRIVTEGPLSNTRIELCVLQGSFGSDGREDWSSEDFRDSILRDRRRGGLLLDGDRFLRLKNGVGILTNLRVTDGSKYDRTGKFRLGARVAEPNPNAANVREGVSQPFKVKDGRGLSYQKYDIPSLNDEIWRLEGIAKGGKRHNELQSKGVTTVEAFLNRLNTDPNQLKQDLGKIGEKTWKKLILHAAKACARHDATQPFLSTGPLVSEPQHLVGSAENLQARQGLPQHELLPLASQGLSVLSASTSHFGESSTCWTTRGSELCRG	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g4329	450	PANTHER	OS02G0177800 PROTEIN	98	375	IPR012416	GO:0005516
	Prci1g4329	450	Pfam	Calmodulin binding protein-like N-terminal domain	147	296	IPR046831	-
	Prci1g4329	450	Pfam	Calmodulin binding protein central domain	309	373	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g4329	Prci-Chr1	57581402	57584714	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g4329	79	376	Calmodulin-binding Proteins	AT4G25800	37.864	5.98e-49	174

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g4329	-		-	pcin:129307776	882.093