Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4328 ATGGTATCTCAAAGGAAATCTCATCAGCCGGAGGGTAATGGCGGGGATCATCCAGTTCCAATTCGAGAGTCAAGACGAGGGAGAAATGGTGATTCAAGACAACCTCCCATCAGCGGCCTTGAAAATATTATAAACGGATTCTTGAAGAAAGACCTGGATTCCTGCTTGGAACCTTTCCTGCGAAGACTGGTGCGAGAAGAGGTGGAACGCAAAATACGGGAATACCTGATTCCAAGAGCATCGCCTTGTCAGGGTGGCACATCTGGAGCCAAACCCTTAGAGTTGCGTTTTATTAACAAACCGCCTGAAACAATATTCACGCTCTCTAACGTAATAGCTGAGGACGAGGAGACACCGCTTCAGATTGCTCTTTTTGATGTTAGATCTCAATCTGTAGTGAGCACTGGTCCTTTGTCCTCTACAAAGGTAGAGATCTTCGCCCTCAATGGTGAGCTCTTTTCCCAAAGGTGTGAGGATTGTACTGAAGAAGAATTCAATGCAAATGTCCTAACCCAAAGGGAGGGTAAGGAGCCATTGCTGAATGGAGATCGGATCCTAACTCTTAAAAATGGAGTTGGTTGTATCTCTAAAATTAAGTTCACTGACAACTCGAGCTGGACAAGAAGCAGAAAGTTCAGCTTGGGAGCCAAAGCTTTGCAACTAACTTCCTGTGGAGCAAGCATCAAGGAAGGTGTAAGTAAACCTTTCGTGGTAAAAGATAACAGGGGAGAGCTGTACAAGAAACATCACCCCCCGCATTTGGAAGATGATGTATGGCGTTTAGAGAAGATAGCCAAAAATGGTATAATTTACCGGCGACTATGTGACCATGGAATAAGGACGGTCGGGGATCTTATGCGGTCTTACATCATTAACCCATCTTCATTGCATGAGAAAGTTGGCAAAATTCCCACGAAGTCATGGGTGGCAATTACTGAACATGCGAAGGAATGTGTTATAGATGATTACAACCTTTACATGTATCATGCAGCAGAACAACCAGTGGGCCTGCTCTTCAATTCCATTTACATCCTTGTAGGAGTGACGTTTGATGGTCAAAACTATTATTCTCCAGATGCTCTCGCACCCAATGAGAGGGGTTTGGTGGAAATGATGAAGCAGCATGCTTACAAAAATTTGGGTGATTTGAAATCAGTTGGTGATCAGACACATTTAAATTTTCCAAGGTCACGGACATATCTACAAGCTTGGCAGGCTAGTGGTCCAGATCAAGGTCTCCAGCAGCTTAATTTCCCAATTGCACAGCAAGCTCAAATTGAAACATGGGCAGGTTCTTATCAACCATATGCTGTTGAAGGAATGCAAAATGACCAAGTATATGCCAGTCCATTTCCAGACTTGGCTCCGATGCTGCAGAACAGTTCAGCAGAAGGTGAATTGTTCCCTGGAATGCAAACTGATGGGCATAGTTGGCCCCATATTGGATCAACTTGGACAGAATACGAAAACCCACATATTCAATCCACAAATTGGGGGCAAGAAAATGGGTTACACTTCAATCCATATGGTGGAGCAGAGCTTGGCAGTCTTTCTAACGGGGGTATAGCCAGAAGTGAGAAACCAAGAGCAGTGTGGTACAAGATTCGTACCGCTCTCAAATGGGTCATATCAGTTAGAAGGGATGCAGTTGCTAGGAGGATGGCAAAGCTAATTTACTATAACTATTAG 1689 0.4423 MVSQRKSHQPEGNGGDHPVPIRESRRGRNGDSRQPPISGLENIINGFLKKDLDSCLEPFLRRLVREEVERKIREYLIPRASPCQGGTSGAKPLELRFINKPPETIFTLSNVIAEDEETPLQIALFDVRSQSVVSTGPLSSTKVEIFALNGELFSQRCEDCTEEEFNANVLTQREGKEPLLNGDRILTLKNGVGCISKIKFTDNSSWTRSRKFSLGAKALQLTSCGASIKEGVSKPFVVKDNRGELYKKHHPPHLEDDVWRLEKIAKNGIIYRRLCDHGIRTVGDLMRSYIINPSSLHEKVGKIPTKSWVAITEHAKECVIDDYNLYMYHAAEQPVGLLFNSIYILVGVTFDGQNYYSPDALAPNERGLVEMMKQHAYKNLGDLKSVGDQTHLNFPRSRTYLQAWQASGPDQGLQQLNFPIAQQAQIETWAGSYQPYAVEGMQNDQVYASPFPDLAPMLQNSSAEGELFPGMQTDGHSWPHIGSTWTEYENPHIQSTNWGQENGLHFNPYGGAELGSLSNGGIARSEKPRAVWYKIRTALKWVISVRRDAVARRMAKLIYYNY 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4328 562 PANTHER OS02G0177800 PROTEIN 48 445 IPR012416 GO:0005516
Prci1g4328 562 Coils Coil 562 562 - -
Prci1g4328 562 MobiDBLite consensus disorder prediction 1 39 - -
Prci1g4328 562 Pfam Calmodulin binding protein central domain 254 318 IPR046830 -
Prci1g4328 562 Pfam Calmodulin binding protein C-terminal domain 325 385 IPR046829 -
Prci1g4328 562 Pfam Calmodulin binding protein-like N-terminal domain 93 241 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4328 Prci-Chr1 57576208 57579871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4328 56 396 Calmodulin-binding Proteins AT5G26920 45.143 2.83e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4328 - - pcin:129304464 1146.34