LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g4326	ATGGTATCTCAAAGGAAATCTCATCAGCCGGAGGGTAATGGCGGGGATCATCCAGTTCCAATTCGAGAGTCAAGACGAGGGAGAAATGGTGATTCAAGACAACCTCCCATCAGCGGCCTTGAAAATATTATAAACGGATTCTTGAAGAAAGACCTGGATTCCTGCTTGGAACCTTTCCTGCGAAGACTGGTGCGAGAAGAGGTGGAACGCAAAATACGGGAATACCTGATTCCAAGAGCATCGCCTTGTCAGGGTGGCACATCTGGAGCCAAACCCTTAGAGTTGCGTTTTATTAACAAACCGCCTGAAACAATATTCACGCTCTCTAACGTAATAGCTGAGGACGAGGAGACACCGCTTCAGATTGCTCTTTTTGATGTTAGATCTCAATCTGTAGTGAGCACTGGTCCTTTGTCCTCTACAAAGGTAGAGATCTTCGCCCTCAATGGTGAGCTCTTTTCCCAAAGGTGTGAGGATTGTACTGAAGAAGAATTCAATGCAAATGTCCTAACCCAAAGGGAGGGTAAGGAGCCATTGCTGAATGGAGATCGGATCCTAACTCTTAAAAATGGAGTTGGTTGTATCTCTAAAATTAAGTTCACTGACAACTCGAGCTGGACAAGAAGCAGAAAGTTCAGCTTGGGAGCCAAAGCTTTGCAACTAACTTCCTGTGGAGCAAGCATCAAGGAAGGTGTAAGTAAACCTTTCGTGGTAAAAGATAACAGGGGAGAGCTGTACAAGAAACATCACCCCCCGCATTTGGAAGATGATGTATGGCGTTTAGAGAAGATAGCCAAAAATGGTATAATTTACCGGCGACTATGTGACCATGGAATAAGGACGGTCGGGGATCTTATGCGGTCTTACATCATTAACCCATCTTCATTGCATGAGAAAGTTGGCAAAATTCCCACGAAGTCATGGGTGGCAATTACTGAACATGCGAAGGAATGTGTTATAGATGATTACAACCTTTACATGTATCATGCAGCAGAACAACCAGTGGGCCTGCTCTTCAATTCCATTTACATCCTTGTAGGAGTGACGTTTGATGGTCAAAACTATTATTCTCCAGATGCTCTCGCACCCAATGAGAGGGGTTTGGTGGAAATGATGAAGCAGCATGCTTACAAAAATTTGGGTGATTTGAAATCAGTTGGTGATCAGACACATTTAAATTTTCCAAGGTCACGGACATATCTACAAGCTTGGCAGGCTAGTGGTCCAGATCAAGGTCTCCAGCAGCTTAATTTCCCAATTGCACAGCAAGGTGTATACATAGGTTCTTATCAACCATATGCTGTTGAAGGAATGCAAAATGACCAAGTATATGCCAGTCCATTTCCAGACTTGGCTCCGATGCTGCAGAACAGTTCAGCAGAAGGTGAATTGTTCCCTGGAATGCAAACTGATGGGCATAGTTGGCCCCATATTGGATCAACTTGGACAGAATACGAAAACCCACATATTCAATCCACAAATTGGGGGCAAGAAAATGGGTTACACTTCAATCCATATGGTGGAGCAGAGCTTGGCAGTCTTTCTAACGGGGGTATAGCCAGAAGTGAGAAACCAAGAGCAGTGTGGTACAAGATTCGTACCGCTCTCAAATGGGTCATATCAGTTAGAAGGGATGCAGTTGCTAGGAGGATGGCAAAGCTAATTTACTATAACTATTAG	1680	0.4417	MVSQRKSHQPEGNGGDHPVPIRESRRGRNGDSRQPPISGLENIINGFLKKDLDSCLEPFLRRLVREEVERKIREYLIPRASPCQGGTSGAKPLELRFINKPPETIFTLSNVIAEDEETPLQIALFDVRSQSVVSTGPLSSTKVEIFALNGELFSQRCEDCTEEEFNANVLTQREGKEPLLNGDRILTLKNGVGCISKIKFTDNSSWTRSRKFSLGAKALQLTSCGASIKEGVSKPFVVKDNRGELYKKHHPPHLEDDVWRLEKIAKNGIIYRRLCDHGIRTVGDLMRSYIINPSSLHEKVGKIPTKSWVAITEHAKECVIDDYNLYMYHAAEQPVGLLFNSIYILVGVTFDGQNYYSPDALAPNERGLVEMMKQHAYKNLGDLKSVGDQTHLNFPRSRTYLQAWQASGPDQGLQQLNFPIAQQGVYIGSYQPYAVEGMQNDQVYASPFPDLAPMLQNSSAEGELFPGMQTDGHSWPHIGSTWTEYENPHIQSTNWGQENGLHFNPYGGAELGSLSNGGIARSEKPRAVWYKIRTALKWVISVRRDAVARRMAKLIYYNY	559

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g4326	559	Pfam	Calmodulin binding protein C-terminal domain	325	385	IPR046829	-
	Prci1g4326	559	PANTHER	OS02G0177800 PROTEIN	48	447	IPR012416	GO:0005516
	Prci1g4326	559	MobiDBLite	consensus disorder prediction	1	39	-	-
	Prci1g4326	559	Pfam	Calmodulin binding protein-like N-terminal domain	93	241	IPR046831	-
	Prci1g4326	559	Pfam	Calmodulin binding protein central domain	254	318	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g4326	Prci-Chr1	57576203	57579871	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g4326	56	396	Calmodulin-binding Proteins	AT5G26920	45.143	2.67e-86	272

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g4326	-		-	pcin:129304464	1126.69