Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4323 ATGGAGATCGAGAAAAGACGTTCCAGGGGAAGCTTCCTCAGCTTGTTTGATTGTAATGGAGTATCACGAAAGAAGCTGTTCCTTGACACTCCTAACTTGCCCGACGAATTGAAGCAAGCGAAGGAAAATATGGGGAACATGACAGAATCACAGTTGACTACGACAAAGGCAGATGAGAGTGGAATAAATCCGAGCAACATCACGAGTTGCGATTTCAACTGTGAGCTATCAGTTAGTAGTGATATAGGATGTGAGAGCAAGGTACCATGCTTAGTAGCGAGACTAATGGGTTTGGATTCATTGCCAACTTCAACACTCAACAAGCTCTCTTTGACTTCGTCGCGTGCCTCTAACTCTCCTGTTTCTTCTCATTGTCATGAGGATGCTGTTGACCCCATGAAATCAAGGGCACATTTAGCGGAAAACAGGACAATTGAAGCAAGACGACTCAAGAATGCAACTATGAGAGTTCTTGATTCGAAACAGAAATCAGAAGCTGCACATCATGCATCCATGCATGAAAACAATGTGGATGCAAATACTTTCGAGGGTTCAAGATACTCAGAAAAGTTTGGTCCTTACAGTCATGGGAGTACAGGAAAATCGACTTTACTTGCAATACAAGCTAAGGTCCGTGTTCAATGCAGAGGTGCATTAACTTCACATGGTAACAGGGGACATAAGCAGAAAGAACAGATTGAGGCTGCATCCAACCAGTTCTTTGGGACCCAGAAACCAATCTGGCGGCAGGTTATGAAGCAGAGAGCTTGTACAAGCCAGAATAGCTGTTACGATGAGCTCGGGCAGGGGGTGCAGATGCATAGTAGTGTTACCAACAAAGTCAGATCAACTTCAATAGTAGAATCCAACAAGTCAACCATACGAAGTTCGACAAGTGGAGCAAAGAAAGTGACAAACAAGAATTTTGTAACTGACAAGGTCAGACCCAACAGTTCTGGCAGAAGAGCAAGTGGTGCCAAAAAGGAGTTTTCACTGATCAAGACAAACAGCAATTCCATGAGGAATAGGTATCCCAAAAGGGATGCTCTACCTGTTAATGTTGTTAATAGCTATGAAGGTAAGTCCATAAAATGCAATATAACAAATGATGGGAGCATGAATCAAGATGCATTAAAAAGGAACACTGGCGAGGATGTTATTTCCTTCACATTTACATCTCCTACGAAGAAAGCGTCACAATCTTCGACTCATACAAACAGCATTGATGTCAATGCTCCTGGTTTACATATGACAGATGGTGATGCTTCAAGTGACCTGTTCAACGGAAAGGCGCGAGATTTGGCATCTAGAACCAACTCACAGGAATGTACTCTGGCAACAAGGGTGCCCTCTGCTGTTTCACTATCCAGTGAGGTTAGCATCGAATCTGGGGAAGGAGACAGAAGATCTCACTCTAATCCGCCTAGCGGTGAACTGCAGGGTATGCATAACCATGGTTGTTCTTCAAGTGATGATCATATGCTTGACATGAATCAAGCTGGGGAACAAGCATACGGGCTTTCAAATTTGGAAGATTATAACAGGCCAAGGAACTTGAAGCTGGAATATGAAAAGGATATGCTTGGCAATGAAAAGTTAATGGAAGGAAATTTTGCAGATAATCAAACAATCAGAAATGATCAGGTTATAAAGACAAACGTGTTTGATATGCTGGAGAAGTGGAGCAGCGGAACAGAAAGCGATGGAGAAGAGCACTTGAAGGTGGAGAGGAATCTTTTGTTTGACTTCGTGAGTGAGTTCATGGAGTTGAGAAGAAGCATGAGGCAAGCTTTTAGTGGGAGGTACAAGGGAAGGGCCCTGGAGAGTCAAGTTTGGTGGGAAGAAGACTTGTGCTCAGAAATCAAGCGTTTTAAAAGCATGCGCGAGGCCATGGTGGATGAGCTCGTGAACATGGACATGAGTTCTCCACATGGCACGTGGCTCCATTTTCAGACTGAACCCTTCCAGCAGATTTTACTTTCAGAGATCGAGTGGGACATCTCAACATCTCTCATCAATGATTTGCTTCTTGATTTGCTGCATCATTAG 2049 0.4353 MEIEKRRSRGSFLSLFDCNGVSRKKLFLDTPNLPDELKQAKENMGNMTESQLTTTKADESGINPSNITSCDFNCELSVSSDIGCESKVPCLVARLMGLDSLPTSTLNKLSLTSSRASNSPVSSHCHEDAVDPMKSRAHLAENRTIEARRLKNATMRVLDSKQKSEAAHHASMHENNVDANTFEGSRYSEKFGPYSHGSTGKSTLLAIQAKVRVQCRGALTSHGNRGHKQKEQIEAASNQFFGTQKPIWRQVMKQRACTSQNSCYDELGQGVQMHSSVTNKVRSTSIVESNKSTIRSSTSGAKKVTNKNFVTDKVRPNSSGRRASGAKKEFSLIKTNSNSMRNRYPKRDALPVNVVNSYEGKSIKCNITNDGSMNQDALKRNTGEDVISFTFTSPTKKASQSSTHTNSIDVNAPGLHMTDGDASSDLFNGKARDLASRTNSQECTLATRVPSAVSLSSEVSIESGEGDRRSHSNPPSGELQGMHNHGCSSSDDHMLDMNQAGEQAYGLSNLEDYNRPRNLKLEYEKDMLGNEKLMEGNFADNQTIRNDQVIKTNVFDMLEKWSSGTESDGEEHLKVERNLLFDFVSEFMELRRSMRQAFSGRYKGRALESQVWWEEDLCSEIKRFKSMREAMVDELVNMDMSSPHGTWLHFQTEPFQQILLSEIEWDISTSLINDLLLDLLHH 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4323 682 MobiDBLite consensus disorder prediction 393 424 - -
Prci1g4323 682 MobiDBLite consensus disorder prediction 473 494 - -
Prci1g4323 682 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 157 678 - -
Prci1g4323 682 MobiDBLite consensus disorder prediction 393 412 - -
Prci1g4323 682 MobiDBLite consensus disorder prediction 437 494 - -
Prci1g4323 682 Pfam DUF761-associated sequence motif 77 105 IPR032795 -
Prci1g4323 682 MobiDBLite consensus disorder prediction 113 132 - -
Prci1g4323 682 MobiDBLite consensus disorder prediction 437 461 - -
Prci1g4323 682 Pfam Domain of unknown function (DUF4378) 521 673 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4323 Prci-Chr1 57551719 57554246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4323 520 680 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.533 6.39e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4323 - - pcin:129314340 1335.86